Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RCCD1A6NED2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.98■□□□□ 0.63
RCCD1A6NED2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.98■□□□□ 0.63
RCCD1A6NED2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RCCD1A6NED2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RCCD1A6NED2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.98■□□□□ 0.63
RCCD1A6NED2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RCCD1A6NED2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RCCD1A6NED2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RCCD1A6NED2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RCCD1A6NED2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RCCD1A6NED2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.98■□□□□ 0.63
RCCD1A6NED2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RCCD1A6NED2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RCCD1A6NED2 AC008550.1-201ENST00000511500 884 ntBASIC18.98■□□□□ 0.63
RCCD1A6NED2 MIR4785-201ENST00000585005 73 ntBASIC18.98■□□□□ 0.63
RCCD1A6NED2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RCCD1A6NED2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RCCD1A6NED2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.98■□□□□ 0.63
RCCD1A6NED2 AC010947.1-201ENST00000623454 693 ntBASIC18.98■□□□□ 0.63
RCCD1A6NED2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RCCD1A6NED2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RCCD1A6NED2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.98■□□□□ 0.63
RCCD1A6NED2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RCCD1A6NED2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.98■□□□□ 0.63
RCCD1A6NED2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.98■□□□□ 0.63
RCCD1A6NED2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.98■□□□□ 0.63
RCCD1A6NED2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.98■□□□□ 0.63
RCCD1A6NED2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RCCD1A6NED2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RCCD1A6NED2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RCCD1A6NED2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RCCD1A6NED2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RCCD1A6NED2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.97■□□□□ 0.63
RCCD1A6NED2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.97■□□□□ 0.63
RCCD1A6NED2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
RCCD1A6NED2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.97■□□□□ 0.63
RCCD1A6NED2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.97■□□□□ 0.63
RCCD1A6NED2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.97■□□□□ 0.63
RCCD1A6NED2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 FAM87A-204ENST00000613235 858 ntBASIC18.97■□□□□ 0.63
RCCD1A6NED2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.97■□□□□ 0.63
RCCD1A6NED2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.97■□□□□ 0.63
RCCD1A6NED2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.97■□□□□ 0.63
RCCD1A6NED2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.97■□□□□ 0.63
RCCD1A6NED2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
RCCD1A6NED2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCCD1A6NED2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.96■□□□□ 0.63
RCCD1A6NED2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.96■□□□□ 0.63
RCCD1A6NED2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 AC018695.7-201ENST00000624587 2492 ntBASIC18.96■□□□□ 0.63
RCCD1A6NED2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.96■□□□□ 0.63
RCCD1A6NED2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.96■□□□□ 0.63
RCCD1A6NED2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RCCD1A6NED2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.96■□□□□ 0.63
RCCD1A6NED2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.96■□□□□ 0.63
RCCD1A6NED2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.96■□□□□ 0.63
RCCD1A6NED2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RCCD1A6NED2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RCCD1A6NED2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
RCCD1A6NED2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.96■□□□□ 0.63
RCCD1A6NED2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms