Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 PMS2P7-201ENST00000506558 1336 ntBASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 AC009947.1-201ENST00000444350 727 ntBASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 AC027601.4-201ENST00000611259 610 ntBASIC25.53■■□□□ 1.68
CCDC144AA2RUR9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 AL591424.1-201ENST00000442569 1213 ntBASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 AC136632.2-201ENST00000512891 861 ntBASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 MIR1199-201ENST00000621445 119 ntBASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 KRT18P55-202ENST00000578578 1546 ntBASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC144AA2RUR9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
CCDC144AA2RUR9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC25.51■■□□□ 1.67
CCDC144AA2RUR9 NCF1C-201ENST00000438382 1427 ntBASIC25.51■■□□□ 1.67
CCDC144AA2RUR9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC25.51■■□□□ 1.67
CCDC144AA2RUR9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
CCDC144AA2RUR9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC25.51■■□□□ 1.67
CCDC144AA2RUR9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC144AA2RUR9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC25.51■■□□□ 1.67
CCDC144AA2RUR9 AC002558.1-201ENST00000488906 803 ntBASIC25.51■■□□□ 1.67
CCDC144AA2RUR9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
CCDC144AA2RUR9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC144AA2RUR9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
CCDC144AA2RUR9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC144AA2RUR9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC144AA2RUR9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC25.51■■□□□ 1.67
CCDC144AA2RUR9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 AC004706.3-202ENST00000621574 984 ntBASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC144AA2RUR9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 AC104581.1-202ENST00000635932 2618 ntBASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 BX842568.4-201ENST00000421222 227 ntBASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC144AA2RUR9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms