Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 IFNL4P1-201ENST00000607083 540 ntBASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 RCN1P2-201ENST00000398357 915 ntBASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 KRT16P4-201ENST00000453883 522 ntBASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 AC111152.3-201ENST00000569699 673 ntBASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 AC114341.1-201ENST00000618070 349 ntBASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.11■□□□□ 0.65
SNX9Q9Y5X1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNX9Q9Y5X1 MIR5100-201ENST00000579544 119 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms