Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AC009078.2-202ENST00000463353 338 ntBASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 AC106795.1-205ENST00000512851 1056 ntBASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 AC124864.1-201ENST00000623408 392 ntBASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 AL353692.3-201ENST00000407031 1396 ntBASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 LINC00167-201ENST00000530583 1419 ntBASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 KRT8P50-201ENST00000562022 1438 ntBASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 AC079781.3-201ENST00000449110 356 ntBASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 AC099336.1-202ENST00000602961 463 ntBASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 AC138894.3-201ENST00000603787 634 ntBASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA6Q9Y5G7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 AC139713.2-201ENST00000641328 2723 ntBASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 AL662844.1-201ENST00000546340 181 ntBASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 AL353801.3-201ENST00000609898 542 ntBASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA6Q9Y5G7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms