Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGA9Q9Y5G4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGA9Q9Y5G4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.71■□□□□ 0.26
PCDHGA9Q9Y5G4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGA9Q9Y5G4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 AC068472.1-201ENST00000474589 881 ntBASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 MTDHP3-201ENST00000594186 672 ntBASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 FAM215A-202ENST00000632077 792 ntBASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGA9Q9Y5G4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 MIR1233-2-201ENST00000408138 82 ntBASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 MIR1233-1-201ENST00000408722 82 ntBASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 RPL13AP23-201ENST00000480739 586 ntBASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 TERC-201ENST00000602385 541 ntBASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 AC009154.2-201ENST00000621177 724 ntBASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGA9Q9Y5G4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms