Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 CA15P1-201ENST00000481698 905 ntBASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 EGLN1P1-201ENST00000531623 762 ntBASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 KRT18P22-201ENST00000402024 1347 ntBASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 AP001094.4-201ENST00000579008 2176 ntBASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 AC211429.1-201ENST00000415277 523 ntBASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 TSPY17P-201ENST00000450329 467 ntBASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3HCC1Q9Y3T6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3HCC1Q9Y3T6 FER1L4-210ENST00000615531 5998 ntBASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 KRT8P9-201ENST00000558927 1449 ntBASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms