Protein–RNA interactions for Protein: Q9Y324

FCF1, rRNA-processing protein FCF1 homolog, humanhuman

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1Q9Y324 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FCF1Q9Y324 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FCF1Q9Y324 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FCF1Q9Y324 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FCF1Q9Y324 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FCF1Q9Y324 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FCF1Q9Y324 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FCF1Q9Y324 KRT16P4-201ENST00000453883 522 ntBASIC18.11■□□□□ 0.49
FCF1Q9Y324 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FCF1Q9Y324 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 MIR5100-201ENST00000579544 119 ntBASIC18.11■□□□□ 0.49
FCF1Q9Y324 RN7SL510P-201ENST00000581311 263 ntBASIC18.11■□□□□ 0.49
FCF1Q9Y324 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.11■□□□□ 0.49
FCF1Q9Y324 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FCF1Q9Y324 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.11■□□□□ 0.49
FCF1Q9Y324 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FCF1Q9Y324 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FCF1Q9Y324 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FCF1Q9Y324 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FCF1Q9Y324 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FCF1Q9Y324 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FCF1Q9Y324 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FCF1Q9Y324 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FCF1Q9Y324 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FCF1Q9Y324 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
FCF1Q9Y324 BCL2-203ENST00000589955 5011 ntBASIC18.11■□□□□ 0.49
FCF1Q9Y324 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FCF1Q9Y324 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FCF1Q9Y324 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.1■□□□□ 0.49
FCF1Q9Y324 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FCF1Q9Y324 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FCF1Q9Y324 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
FCF1Q9Y324 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FCF1Q9Y324 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
FCF1Q9Y324 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.1■□□□□ 0.49
FCF1Q9Y324 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FCF1Q9Y324 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.1■□□□□ 0.49
FCF1Q9Y324 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.1■□□□□ 0.49
FCF1Q9Y324 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FCF1Q9Y324 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FCF1Q9Y324 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.1■□□□□ 0.49
FCF1Q9Y324 AC007967.3-201ENST00000434308 558 ntBASIC18.1■□□□□ 0.49
FCF1Q9Y324 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.1■□□□□ 0.49
FCF1Q9Y324 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.1■□□□□ 0.49
FCF1Q9Y324 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.1■□□□□ 0.49
FCF1Q9Y324 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.1■□□□□ 0.49
FCF1Q9Y324 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FCF1Q9Y324 AL591684.3-201ENST00000605187 298 ntBASIC18.1■□□□□ 0.49
FCF1Q9Y324 AL691432.3-201ENST00000621860 400 ntBASIC18.1■□□□□ 0.49
FCF1Q9Y324 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FCF1Q9Y324 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.1■□□□□ 0.49
FCF1Q9Y324 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FCF1Q9Y324 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.1■□□□□ 0.49
FCF1Q9Y324 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FCF1Q9Y324 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.1■□□□□ 0.49
FCF1Q9Y324 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.1■□□□□ 0.49
FCF1Q9Y324 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FCF1Q9Y324 AC010460.3-201ENST00000511359 1579 ntBASIC18.09■□□□□ 0.49
FCF1Q9Y324 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FCF1Q9Y324 AL390961.4-201ENST00000623958 2535 ntBASIC18.09■□□□□ 0.49
FCF1Q9Y324 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FCF1Q9Y324 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.09■□□□□ 0.49
FCF1Q9Y324 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FCF1Q9Y324 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FCF1Q9Y324 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FCF1Q9Y324 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
FCF1Q9Y324 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.09■□□□□ 0.49
FCF1Q9Y324 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FCF1Q9Y324 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.09■□□□□ 0.49
FCF1Q9Y324 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.09■□□□□ 0.49
FCF1Q9Y324 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.09■□□□□ 0.49
FCF1Q9Y324 AC011467.2-201ENST00000598425 242 ntBASIC18.09■□□□□ 0.49
FCF1Q9Y324 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FCF1Q9Y324 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.09■□□□□ 0.49
FCF1Q9Y324 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FCF1Q9Y324 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.09■□□□□ 0.49
FCF1Q9Y324 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FCF1Q9Y324 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
FCF1Q9Y324 AC009949.1-201ENST00000623048 1830 ntBASIC18.09■□□□□ 0.49
FCF1Q9Y324 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FCF1Q9Y324 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms