Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 TSPY12P-201ENST00000421279 868 ntBASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 AP000347.1-202ENST00000435868 847 ntBASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 FDX1P1-201ENST00000449115 551 ntBASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 GUSBP12-201ENST00000513727 720 ntBASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 AC012313.10-201ENST00000623509 926 ntBASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.41■□□□□ 0.22
RPH3AQ9Y2J0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 AP002383.4-201ENST00000442518 975 ntBASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 AC113404.2-201ENST00000507884 177 ntBASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 AC090616.6-201ENST00000582640 721 ntBASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 AC092329.2-201ENST00000598402 547 ntBASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 AC006538.3-201ENST00000612495 578 ntBASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPH3AQ9Y2J0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RPH3AQ9Y2J0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RPH3AQ9Y2J0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RPH3AQ9Y2J0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
RPH3AQ9Y2J0 NOC2LP1-202ENST00000452600 2235 ntBASIC16.39■□□□□ 0.22
RPH3AQ9Y2J0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
RPH3AQ9Y2J0 AC007613.1-201ENST00000572811 2597 ntBASIC16.39■□□□□ 0.22
RPH3AQ9Y2J0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 AL096828.2-201ENST00000567259 1965 ntBASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 ATP5G2P1-201ENST00000433580 426 ntBASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 AL592071.1-201ENST00000611956 408 ntBASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 NPAP1P7-201ENST00000613027 823 ntBASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPH3AQ9Y2J0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms