Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF6Q9Y252 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF6Q9Y252 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF6Q9Y252 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF6Q9Y252 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF6Q9Y252 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
RNF6Q9Y252 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF6Q9Y252 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF6Q9Y252 PKD1P1-201ENST00000458669 6805 ntBASIC16.86■□□□□ 0.29
RNF6Q9Y252 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RNF6Q9Y252 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF6Q9Y252 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF6Q9Y252 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF6Q9Y252 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF6Q9Y252 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF6Q9Y252 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF6Q9Y252 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF6Q9Y252 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF6Q9Y252 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF6Q9Y252 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF6Q9Y252 STARP1-201ENST00000397973 869 ntBASIC16.86■□□□□ 0.29
RNF6Q9Y252 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF6Q9Y252 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.86■□□□□ 0.29
RNF6Q9Y252 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.86■□□□□ 0.29
RNF6Q9Y252 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RNF6Q9Y252 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
RNF6Q9Y252 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF6Q9Y252 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF6Q9Y252 PP12613-201ENST00000424958 2230 ntBASIC16.86■□□□□ 0.29
RNF6Q9Y252 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF6Q9Y252 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF6Q9Y252 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF6Q9Y252 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF6Q9Y252 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF6Q9Y252 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RNF6Q9Y252 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RNF6Q9Y252 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RNF6Q9Y252 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 DUSP5P1-201ENST00000441325 1139 ntBASIC16.85■□□□□ 0.29
RNF6Q9Y252 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF6Q9Y252 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF6Q9Y252 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.85■□□□□ 0.29
RNF6Q9Y252 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF6Q9Y252 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF6Q9Y252 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF6Q9Y252 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RNF6Q9Y252 LINC01311-201ENST00000565162 1445 ntBASIC16.85■□□□□ 0.29
RNF6Q9Y252 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF6Q9Y252 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF6Q9Y252 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.85■□□□□ 0.29
RNF6Q9Y252 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF6Q9Y252 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RNF6Q9Y252 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF6Q9Y252 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RNF6Q9Y252 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RNF6Q9Y252 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF6Q9Y252 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RNF6Q9Y252 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF6Q9Y252 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF6Q9Y252 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF6Q9Y252 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF6Q9Y252 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF6Q9Y252 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF6Q9Y252 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RNF6Q9Y252 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF6Q9Y252 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF6Q9Y252 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF6Q9Y252 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.84■□□□□ 0.29
RNF6Q9Y252 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF6Q9Y252 MIR4674-201ENST00000582457 87 ntBASIC16.84■□□□□ 0.29
RNF6Q9Y252 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
RNF6Q9Y252 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.84■□□□□ 0.29
RNF6Q9Y252 HYMAI.1-201ENST00000620949 238 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms