Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 IGHV3-47-201ENST00000425060 335 ntBASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 GNAS-203ENST00000306120 1878 ntBASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 AC010460.3-201ENST00000511359 1579 ntBASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 AP000867.3-201ENST00000524675 377 ntBASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA4Q9UN74 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHA4Q9UN74 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.39■□□□□ 0.86
PCDHA4Q9UN74 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
PCDHA4Q9UN74 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
PCDHA4Q9UN74 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PCDHA4Q9UN74 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 NSUN5P1-202ENST00000421140 1535 ntBASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 NSUN5P2-203ENST00000457352 1529 ntBASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms