Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 PGM5P2-202ENST00000637225 1043 ntBASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 AC138028.4-201ENST00000564984 1845 ntBASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 ZNF259P1-201ENST00000407656 1365 ntBASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 BICD1-207ENST00000551848 1962 ntBASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 KRT18P58-201ENST00000527480 1120 ntBASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 AC109462.3-201ENST00000573934 613 ntBASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
SYNPO2Q9UMS6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 AC004408.2-201ENST00000623613 2777 ntBASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 AC098831.1-202ENST00000438821 336 ntBASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.48■□□□□ 0.87
SYNPO2Q9UMS6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 ABALON-201ENST00000629058 1903 ntBASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 AC073621.1-201ENST00000392730 636 ntBASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 AC009113.1-201ENST00000570267 2443 ntBASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNPO2Q9UMS6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms