Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EBF1Q9UH73 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EBF1Q9UH73 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.2■□□□□ 0.5
EBF1Q9UH73 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.2■□□□□ 0.5
EBF1Q9UH73 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EBF1Q9UH73 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EBF1Q9UH73 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EBF1Q9UH73 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.2■□□□□ 0.5
EBF1Q9UH73 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EBF1Q9UH73 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.2■□□□□ 0.5
EBF1Q9UH73 IGHV3-22-201ENST00000520721 359 ntBASIC18.2■□□□□ 0.5
EBF1Q9UH73 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.2■□□□□ 0.5
EBF1Q9UH73 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EBF1Q9UH73 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.2■□□□□ 0.5
EBF1Q9UH73 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.2■□□□□ 0.5
EBF1Q9UH73 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.2■□□□□ 0.5
EBF1Q9UH73 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.2■□□□□ 0.5
EBF1Q9UH73 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.2■□□□□ 0.5
EBF1Q9UH73 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.2■□□□□ 0.5
EBF1Q9UH73 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EBF1Q9UH73 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EBF1Q9UH73 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
EBF1Q9UH73 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
EBF1Q9UH73 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
EBF1Q9UH73 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EBF1Q9UH73 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
EBF1Q9UH73 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EBF1Q9UH73 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
EBF1Q9UH73 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
EBF1Q9UH73 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
EBF1Q9UH73 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.19■□□□□ 0.5
EBF1Q9UH73 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.19■□□□□ 0.5
EBF1Q9UH73 MTCL1P1-201ENST00000446207 792 ntBASIC18.19■□□□□ 0.5
EBF1Q9UH73 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.19■□□□□ 0.5
EBF1Q9UH73 PGAM5P1-201ENST00000518923 814 ntBASIC18.19■□□□□ 0.5
EBF1Q9UH73 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.19■□□□□ 0.5
EBF1Q9UH73 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.19■□□□□ 0.5
EBF1Q9UH73 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.19■□□□□ 0.5
EBF1Q9UH73 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.19■□□□□ 0.5
EBF1Q9UH73 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.19■□□□□ 0.5
EBF1Q9UH73 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
EBF1Q9UH73 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
EBF1Q9UH73 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.19■□□□□ 0.5
EBF1Q9UH73 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
EBF1Q9UH73 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EBF1Q9UH73 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
EBF1Q9UH73 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EBF1Q9UH73 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.18■□□□□ 0.5
EBF1Q9UH73 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EBF1Q9UH73 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.18■□□□□ 0.5
EBF1Q9UH73 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
EBF1Q9UH73 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
EBF1Q9UH73 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EBF1Q9UH73 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
EBF1Q9UH73 AC125634.1-201ENST00000438758 1403 ntBASIC18.18■□□□□ 0.5
EBF1Q9UH73 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EBF1Q9UH73 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EBF1Q9UH73 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EBF1Q9UH73 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.18■□□□□ 0.5
EBF1Q9UH73 ABCD1P5-201ENST00000445663 754 ntBASIC18.18■□□□□ 0.5
EBF1Q9UH73 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
EBF1Q9UH73 AC021087.4-201ENST00000563761 564 ntBASIC18.18■□□□□ 0.5
EBF1Q9UH73 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.18■□□□□ 0.5
EBF1Q9UH73 AC027601.4-201ENST00000611259 610 ntBASIC18.18■□□□□ 0.5
EBF1Q9UH73 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
EBF1Q9UH73 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
EBF1Q9UH73 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
EBF1Q9UH73 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EBF1Q9UH73 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EBF1Q9UH73 AL499627.1-201ENST00000569373 2188 ntBASIC18.18■□□□□ 0.5
EBF1Q9UH73 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EBF1Q9UH73 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.18■□□□□ 0.5
EBF1Q9UH73 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EBF1Q9UH73 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EBF1Q9UH73 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.18■□□□□ 0.5
EBF1Q9UH73 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EBF1Q9UH73 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.17■□□□□ 0.5
EBF1Q9UH73 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EBF1Q9UH73 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.17■□□□□ 0.5
EBF1Q9UH73 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EBF1Q9UH73 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms