Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 MTND4P5-201ENST00000435821 1374 ntBASIC20.74■□□□□ 0.91
RNF216Q9NWF9 MTND4P4-201ENST00000439033 1366 ntBASIC20.74■□□□□ 0.91
RNF216Q9NWF9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 KRT8P45-201ENST00000414328 1447 ntBASIC20.74■□□□□ 0.91
RNF216Q9NWF9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 CETN4P-201ENST00000432407 469 ntBASIC20.74■□□□□ 0.91
RNF216Q9NWF9 TSPY21P-201ENST00000433481 731 ntBASIC20.74■□□□□ 0.91
RNF216Q9NWF9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.74■□□□□ 0.91
RNF216Q9NWF9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 AL359075.1-203ENST00000462729 1002 ntBASIC20.74■□□□□ 0.91
RNF216Q9NWF9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 AC106868.1-201ENST00000505272 992 ntBASIC20.74■□□□□ 0.91
RNF216Q9NWF9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 LTB4R2-202ENST00000528054 3092 ntBASIC20.74■□□□□ 0.91
RNF216Q9NWF9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 AC013244.3-201ENST00000605614 388 ntBASIC20.74■□□□□ 0.91
RNF216Q9NWF9 Z93930.3-201ENST00000607919 749 ntBASIC20.74■□□□□ 0.91
RNF216Q9NWF9 TTR-204ENST00000610404 1040 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
RNF216Q9NWF9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 Y_RNA.110-201ENST00000363220 99 ntBASIC20.73■□□□□ 0.91
RNF216Q9NWF9 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 AC003075.1-206ENST00000448664 541 ntTSL 3 BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 LINC01377-201ENST00000505396 649 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 QRSL1P3-201ENST00000552666 1316 ntBASIC20.73■□□□□ 0.91
RNF216Q9NWF9 AC006480.2-201ENST00000609770 1337 ntBASIC20.73■□□□□ 0.91
RNF216Q9NWF9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF216Q9NWF9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 AL138781.2-201ENST00000617896 1843 ntBASIC20.72■□□□□ 0.91
RNF216Q9NWF9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 STARP1-201ENST00000397973 869 ntBASIC20.72■□□□□ 0.91
RNF216Q9NWF9 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 OR13Z2P-201ENST00000606338 555 ntBASIC20.72■□□□□ 0.91
RNF216Q9NWF9 AC080013.3-201ENST00000606839 578 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms