Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 RPL13AP23-201ENST00000480739 586 ntBASIC18.48■□□□□ 0.55
HPS4Q9NQG7 POLD2P1-201ENST00000511220 997 ntBASIC18.48■□□□□ 0.55
HPS4Q9NQG7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPS4Q9NQG7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HPS4Q9NQG7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 AC139530.3-201ENST00000620344 690 ntBASIC18.46■□□□□ 0.55
HPS4Q9NQG7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HPS4Q9NQG7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
HPS4Q9NQG7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 AL138781.2-201ENST00000617896 1843 ntBASIC18.45■□□□□ 0.54
HPS4Q9NQG7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 RPS2P1-201ENST00000434010 821 ntBASIC18.45■□□□□ 0.54
HPS4Q9NQG7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms