Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 KRT18P65-201ENST00000439811 1286 ntBASIC15.65■□□□□ 0.1
CDH20Q9HBT6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 AC135050.7-201ENST00000624508 2218 ntBASIC15.65■□□□□ 0.1
CDH20Q9HBT6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
CDH20Q9HBT6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 AC090616.6-201ENST00000582640 721 ntBASIC15.64■□□□□ 0.09
CDH20Q9HBT6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 AC069148.1-201ENST00000608741 768 ntBASIC15.64■□□□□ 0.09
CDH20Q9HBT6 IGHV3-41-201ENST00000613121 348 ntBASIC15.64■□□□□ 0.09
CDH20Q9HBT6 AC009154.2-201ENST00000621177 724 ntBASIC15.64■□□□□ 0.09
CDH20Q9HBT6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH20Q9HBT6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 AP000997.3-201ENST00000623333 2250 ntBASIC15.63■□□□□ 0.09
CDH20Q9HBT6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH20Q9HBT6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH20Q9HBT6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH20Q9HBT6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH20Q9HBT6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH20Q9HBT6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms