Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
BCAS3Q9H6U6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 AP001005.1-201ENST00000571755 1248 ntBASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 AC120114.3-201ENST00000611923 658 ntBASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BCAS3Q9H6U6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 IL9RP2-201ENST00000423948 1312 ntBASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 ABALON-201ENST00000629058 1903 ntBASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 AC021087.4-201ENST00000563761 564 ntBASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 MIR7706-201ENST00000613747 67 ntBASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 BX640515.1-201ENST00000617215 977 ntBASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 AF228730.7-201ENST00000641842 219 ntBASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 AL133373.2-201ENST00000623187 2828 ntBASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
BCAS3Q9H6U6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 AC097374.2-201ENST00000618617 1306 ntBASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 RBM17P3-201ENST00000417687 1192 ntBASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BCAS3Q9H6U6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms