Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 REXO1L11P-201ENST00000620964 1927 ntBASIC18.62■□□□□ 0.57
DDX47Q9H0S4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 AL355355.2-201ENST00000442321 338 ntBASIC18.62■□□□□ 0.57
DDX47Q9H0S4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 AL049637.2-201ENST00000641778 930 ntBASIC18.62■□□□□ 0.57
DDX47Q9H0S4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 LINC00167-201ENST00000530583 1419 ntBASIC18.62■□□□□ 0.57
DDX47Q9H0S4 AC092338.2-201ENST00000568827 1415 ntBASIC18.62■□□□□ 0.57
DDX47Q9H0S4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX47Q9H0S4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 UBALD1-205ENST00000590891 2641 ntBASIC18.61■□□□□ 0.57
DDX47Q9H0S4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 AC009949.1-201ENST00000623048 1830 ntBASIC18.61■□□□□ 0.57
DDX47Q9H0S4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 AC022898.2-201ENST00000616822 1312 ntBASIC18.61■□□□□ 0.57
DDX47Q9H0S4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 AC026471.5-201ENST00000615068 467 ntBASIC18.61■□□□□ 0.57
DDX47Q9H0S4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
DDX47Q9H0S4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 AL118508.1-201ENST00000613502 2345 ntBASIC18.6■□□□□ 0.57
DDX47Q9H0S4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms