Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 AC109462.3-201ENST00000573934 613 ntBASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 STK25P1-201ENST00000585406 838 ntBASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 AL078644.1-201ENST00000609881 752 ntBASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 MRPL20P1-201ENST00000400819 433 ntBASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CRAMP1Q96RY5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CRAMP1Q96RY5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CRAMP1Q96RY5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.71■■□□□ 1.07
CRAMP1Q96RY5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CRAMP1Q96RY5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CRAMP1Q96RY5 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CRAMP1Q96RY5 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.71■■□□□ 1.07
CRAMP1Q96RY5 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CRAMP1Q96RY5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CRAMP1Q96RY5 AC096734.2-201ENST00000562054 433 ntBASIC21.71■■□□□ 1.07
CRAMP1Q96RY5 PDPK2P-202ENST00000562415 1191 ntBASIC21.71■■□□□ 1.07
CRAMP1Q96RY5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.71■■□□□ 1.07
CRAMP1Q96RY5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CRAMP1Q96RY5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CRAMP1Q96RY5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CRAMP1Q96RY5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CRAMP1Q96RY5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 PTCHD3P3-201ENST00000403073 906 ntBASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 AL645939.2-201ENST00000427340 991 ntBASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 CEND1P1-201ENST00000451006 455 ntBASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 AC004877.2-201ENST00000623941 599 ntBASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CRAMP1Q96RY5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CRAMP1Q96RY5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.69■■□□□ 1.06
CRAMP1Q96RY5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.69■■□□□ 1.06
CRAMP1Q96RY5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CRAMP1Q96RY5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CRAMP1Q96RY5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CRAMP1Q96RY5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CRAMP1Q96RY5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CRAMP1Q96RY5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CRAMP1Q96RY5 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CRAMP1Q96RY5 AP002414.1-201ENST00000391405 1147 ntBASIC21.69■■□□□ 1.06
CRAMP1Q96RY5 RHOQP3-201ENST00000437982 621 ntBASIC21.69■■□□□ 1.06
CRAMP1Q96RY5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CRAMP1Q96RY5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.69■■□□□ 1.06
CRAMP1Q96RY5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
CRAMP1Q96RY5 OR7E47P-204ENST00000575924 449 ntBASIC21.69■■□□□ 1.06
CRAMP1Q96RY5 AP002472.1-201ENST00000577490 586 ntBASIC21.69■■□□□ 1.06
CRAMP1Q96RY5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms