Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 AC132872.4-202ENST00000622924 2756 ntBASIC16.85■□□□□ 0.29
NR1H4Q96RI1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 AP006587.1-201ENST00000534129 1502 ntBASIC16.84■□□□□ 0.29
NR1H4Q96RI1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H4Q96RI1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
NR1H4Q96RI1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
NR1H4Q96RI1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NR1H4Q96RI1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NR1H4Q96RI1 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
NR1H4Q96RI1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NR1H4Q96RI1 AC007326.2-201ENST00000624224 7579 ntBASIC16.83■□□□□ 0.29
NR1H4Q96RI1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 KRT18P41-201ENST00000518924 1277 ntBASIC16.83■□□□□ 0.28
NR1H4Q96RI1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 AC010980.2-201ENST00000587099 1412 ntBASIC16.83■□□□□ 0.28
NR1H4Q96RI1 AC092068.3-201ENST00000587894 2016 ntBASIC16.83■□□□□ 0.28
NR1H4Q96RI1 AC022517.1-201ENST00000592429 346 ntBASIC16.83■□□□□ 0.28
NR1H4Q96RI1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 AL589743.5-201ENST00000616611 1050 ntBASIC16.83■□□□□ 0.28
NR1H4Q96RI1 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR1H4Q96RI1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 AC060834.1-201ENST00000443027 2032 ntBASIC16.82■□□□□ 0.28
NR1H4Q96RI1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms