Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF558Q96NG5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 KLF4P1-201ENST00000412782 1185 ntBASIC18.9■□□□□ 0.62
ZNF558Q96NG5 ELK2BP-201ENST00000415014 1224 ntBASIC18.9■□□□□ 0.62
ZNF558Q96NG5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 PMS2P2-201ENST00000425039 1128 ntBASIC18.9■□□□□ 0.62
ZNF558Q96NG5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF558Q96NG5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF558Q96NG5 AL049757.1-201ENST00000616842 1596 ntBASIC18.89■□□□□ 0.62
ZNF558Q96NG5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF558Q96NG5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 AC132938.5-201ENST00000624980 1813 ntBASIC18.89■□□□□ 0.61
ZNF558Q96NG5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 NCF1C-201ENST00000438382 1427 ntBASIC18.89■□□□□ 0.61
ZNF558Q96NG5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF558Q96NG5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 AC003669.1-201ENST00000334569 611 ntBASIC18.88■□□□□ 0.61
ZNF558Q96NG5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 CRYGEP-201ENST00000412192 528 ntBASIC18.88■□□□□ 0.61
ZNF558Q96NG5 KRT18P2-201ENST00000447938 1258 ntBASIC18.88■□□□□ 0.61
ZNF558Q96NG5 SIGLEC30P-201ENST00000455569 941 ntBASIC18.88■□□□□ 0.61
ZNF558Q96NG5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms