Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.78■□□□□ 0.92
CCDC17Q96LX7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 SPDYE21P-201ENST00000413323 827 ntBASIC20.78■□□□□ 0.92
CCDC17Q96LX7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC17Q96LX7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC17Q96LX7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC17Q96LX7 SIRPAP1-201ENST00000448467 1770 ntBASIC20.77■□□□□ 0.92
CCDC17Q96LX7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC17Q96LX7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC17Q96LX7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC17Q96LX7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC17Q96LX7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC17Q96LX7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC17Q96LX7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC17Q96LX7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC17Q96LX7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC17Q96LX7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CCDC17Q96LX7 AC008735.5-201ENST00000623544 497 ntBASIC20.77■□□□□ 0.92
CCDC17Q96LX7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC17Q96LX7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC17Q96LX7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CCDC17Q96LX7 KRT18P55-202ENST00000578578 1546 ntBASIC20.77■□□□□ 0.92
CCDC17Q96LX7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC17Q96LX7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.77■□□□□ 0.91
CCDC17Q96LX7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC17Q96LX7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 AP000997.3-201ENST00000623333 2250 ntBASIC20.76■□□□□ 0.91
CCDC17Q96LX7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 AC009949.1-201ENST00000623048 1830 ntBASIC20.76■□□□□ 0.91
CCDC17Q96LX7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 LAGE3P1-201ENST00000425356 484 ntBASIC20.76■□□□□ 0.91
CCDC17Q96LX7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 BX005266.1-201ENST00000473402 457 ntBASIC20.76■□□□□ 0.91
CCDC17Q96LX7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 SLC25A1P1-201ENST00000528351 927 ntBASIC20.76■□□□□ 0.91
CCDC17Q96LX7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC17Q96LX7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 AL020996.1-203ENST00000536896 2307 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms