Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.1■□□□□ 0.01
SPG11Q96JI7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 ACTG1P14-201ENST00000446382 1122 ntBASIC15.1■□□□□ 0.01
SPG11Q96JI7 PAWRP1-201ENST00000451083 565 ntBASIC15.1■□□□□ 0.01
SPG11Q96JI7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.1■□□□□ 0.01
SPG11Q96JI7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.1■□□□□ 0.01
SPG11Q96JI7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.1■□□□□ 0.01
SPG11Q96JI7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.1■□□□□ 0.01
SPG11Q96JI7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SPG11Q96JI7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.1■□□□□ 0.01
SPG11Q96JI7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.1■□□□□ 0.01
SPG11Q96JI7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SPG11Q96JI7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SPG11Q96JI7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SPG11Q96JI7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.1■□□□□ 0.01
SPG11Q96JI7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SPG11Q96JI7 KLF4P1-201ENST00000412782 1185 ntBASIC15.09■□□□□ 0.01
SPG11Q96JI7 AC245100.3-201ENST00000441281 285 ntBASIC15.09■□□□□ 0.01
SPG11Q96JI7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.09■□□□□ 0.01
SPG11Q96JI7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 AC087641.1-201ENST00000557561 1021 ntBASIC15.09■□□□□ 0.01
SPG11Q96JI7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.09■□□□□ 0.01
SPG11Q96JI7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
SPG11Q96JI7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.09■□□□□ 0.01
SPG11Q96JI7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.09■□□□□ 0.01
SPG11Q96JI7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 AC010460.3-201ENST00000511359 1579 ntBASIC15.09■□□□□ 0.01
SPG11Q96JI7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.09■□□□□ 0.01
SPG11Q96JI7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.09■□□□□ 0.01
SPG11Q96JI7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SPG11Q96JI7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.09■□□□□ 0.01
SPG11Q96JI7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.09■□□□□ 0.01
SPG11Q96JI7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 DUX4L17-201ENST00000557360 1267 ntBASIC15.09■□□□□ 0.01
SPG11Q96JI7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SPG11Q96JI7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.09■□□□□ 0.01
SPG11Q96JI7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SPG11Q96JI7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SPG11Q96JI7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.09■□□□□ 0.01
SPG11Q96JI7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPG11Q96JI7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SPG11Q96JI7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SPG11Q96JI7 AC007967.3-201ENST00000434308 558 ntBASIC15.08■□□□□ 0.01
SPG11Q96JI7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.08■□□□□ 0.01
SPG11Q96JI7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.08■□□□□ 0.01
SPG11Q96JI7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SPG11Q96JI7 KRT8P47-201ENST00000604727 1398 ntBASIC15.08■□□□□ 0.01
SPG11Q96JI7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SPG11Q96JI7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.08■□□□□ 0
SPG11Q96JI7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SPG11Q96JI7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.08■□□□□ 0
SPG11Q96JI7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.08■□□□□ 0
SPG11Q96JI7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.08■□□□□ 0
SPG11Q96JI7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SPG11Q96JI7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.08■□□□□ 0
SPG11Q96JI7 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.08■□□□□ 0
SPG11Q96JI7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SPG11Q96JI7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.08■□□□□ 0
SPG11Q96JI7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SPG11Q96JI7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.08■□□□□ 0
SPG11Q96JI7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.08■□□□□ 0
SPG11Q96JI7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.08■□□□□ 0
SPG11Q96JI7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.08■□□□□ 0
SPG11Q96JI7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.08■□□□□ 0
SPG11Q96JI7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SPG11Q96JI7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SPG11Q96JI7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.08■□□□□ 0
SPG11Q96JI7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.08■□□□□ 0
SPG11Q96JI7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SPG11Q96JI7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SPG11Q96JI7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SPG11Q96JI7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms