Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA5Q96FF9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA5Q96FF9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.8■□□□□ 0.92
CDCA5Q96FF9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.8■□□□□ 0.92
CDCA5Q96FF9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA5Q96FF9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA5Q96FF9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.79■□□□□ 0.92
CDCA5Q96FF9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.79■□□□□ 0.92
CDCA5Q96FF9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA5Q96FF9 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.79■□□□□ 0.92
CDCA5Q96FF9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.79■□□□□ 0.92
CDCA5Q96FF9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.79■□□□□ 0.92
CDCA5Q96FF9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA5Q96FF9 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.79■□□□□ 0.92
CDCA5Q96FF9 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.79■□□□□ 0.92
CDCA5Q96FF9 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.79■□□□□ 0.92
CDCA5Q96FF9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA5Q96FF9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA5Q96FF9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.79■□□□□ 0.92
CDCA5Q96FF9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA5Q96FF9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA5Q96FF9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 AP002414.1-201ENST00000391405 1147 ntBASIC20.78■□□□□ 0.92
CDCA5Q96FF9 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 AC022145.2-201ENST00000598203 171 ntBASIC20.78■□□□□ 0.92
CDCA5Q96FF9 GGTLC5P-201ENST00000617623 998 ntBASIC20.78■□□□□ 0.92
CDCA5Q96FF9 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA5Q96FF9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDCA5Q96FF9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDCA5Q96FF9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
CDCA5Q96FF9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDCA5Q96FF9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDCA5Q96FF9 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.77■□□□□ 0.92
CDCA5Q96FF9 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.77■□□□□ 0.92
CDCA5Q96FF9 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.77■□□□□ 0.92
CDCA5Q96FF9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDCA5Q96FF9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.77■□□□□ 0.92
CDCA5Q96FF9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDCA5Q96FF9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDCA5Q96FF9 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDCA5Q96FF9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CDCA5Q96FF9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDCA5Q96FF9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDCA5Q96FF9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.77■□□□□ 0.91
CDCA5Q96FF9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.77■□□□□ 0.91
CDCA5Q96FF9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDCA5Q96FF9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 AC023141.5-201ENST00000458585 616 ntBASIC20.76■□□□□ 0.91
CDCA5Q96FF9 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 AC019129.2-201ENST00000609837 1235 ntBASIC20.76■□□□□ 0.91
CDCA5Q96FF9 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 LINC00628-201ENST00000628516 1289 ntBASIC20.76■□□□□ 0.91
CDCA5Q96FF9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 AFG3L1P-217ENST00000557444 2447 ntBASIC20.76■□□□□ 0.91
CDCA5Q96FF9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.76■□□□□ 0.91
CDCA5Q96FF9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDCA5Q96FF9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDCA5Q96FF9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.75■□□□□ 0.91
CDCA5Q96FF9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDCA5Q96FF9 AC093010.1-201ENST00000473625 1624 ntBASIC20.75■□□□□ 0.91
CDCA5Q96FF9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDCA5Q96FF9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms