Protein–RNA interactions for Protein: Q96DC9

OTUB2, Ubiquitin thioesterase OTUB2, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB2Q96DC9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.18■□□□□ 0.5
OTUB2Q96DC9 AC093503.3-201ENST00000624917 2352 ntBASIC18.18■□□□□ 0.5
OTUB2Q96DC9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 AC098831.1-202ENST00000438821 336 ntBASIC18.18■□□□□ 0.5
OTUB2Q96DC9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 AC092910.1-201ENST00000482027 1129 ntBASIC18.18■□□□□ 0.5
OTUB2Q96DC9 AC012640.2-201ENST00000561606 901 ntBASIC18.18■□□□□ 0.5
OTUB2Q96DC9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 PGM5P2-202ENST00000637225 1043 ntBASIC18.18■□□□□ 0.5
OTUB2Q96DC9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
OTUB2Q96DC9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 AC003669.1-201ENST00000334569 611 ntBASIC18.17■□□□□ 0.5
OTUB2Q96DC9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OTUB2Q96DC9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 AL589182.2-201ENST00000619332 1049 ntBASIC18.16■□□□□ 0.5
OTUB2Q96DC9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 PMS2P7-201ENST00000506558 1336 ntBASIC18.16■□□□□ 0.5
OTUB2Q96DC9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUB2Q96DC9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OTUB2Q96DC9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
OTUB2Q96DC9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.15■□□□□ 0.5
OTUB2Q96DC9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.15■□□□□ 0.5
OTUB2Q96DC9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.15■□□□□ 0.5
OTUB2Q96DC9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OTUB2Q96DC9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
OTUB2Q96DC9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OTUB2Q96DC9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OTUB2Q96DC9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms