Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 KRT18P21-201ENST00000515767 1272 ntBASIC17.22■□□□□ 0.35
UBE2E3Q969T4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 AL390719.2-201ENST00000606993 987 ntBASIC17.22■□□□□ 0.35
UBE2E3Q969T4 AC083849.1-201ENST00000615227 514 ntBASIC17.22■□□□□ 0.35
UBE2E3Q969T4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 AL645929.1-201ENST00000420084 975 ntBASIC17.21■□□□□ 0.35
UBE2E3Q969T4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBE2E3Q969T4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.21■□□□□ 0.34
UBE2E3Q969T4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
UBE2E3Q969T4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
UBE2E3Q969T4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 DDX43P3-201ENST00000441064 443 ntBASIC17.2■□□□□ 0.34
UBE2E3Q969T4 FAM210CP-201ENST00000445714 574 ntBASIC17.2■□□□□ 0.34
UBE2E3Q969T4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 AC112698.1-201ENST00000510299 916 ntBASIC17.2■□□□□ 0.34
UBE2E3Q969T4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 AL049597.2-201ENST00000565575 961 ntBASIC17.2■□□□□ 0.34
UBE2E3Q969T4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 Z83836.1-201ENST00000624605 1642 ntBASIC17.2■□□□□ 0.34
UBE2E3Q969T4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
UBE2E3Q969T4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.19■□□□□ 0.34
UBE2E3Q969T4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2E3Q969T4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2E3Q969T4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.19■□□□□ 0.34
UBE2E3Q969T4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2E3Q969T4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2E3Q969T4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2E3Q969T4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2E3Q969T4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2E3Q969T4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.19■□□□□ 0.34
UBE2E3Q969T4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.19■□□□□ 0.34
UBE2E3Q969T4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2E3Q969T4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2E3Q969T4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2E3Q969T4 AC100803.2-201ENST00000562459 1963 ntBASIC17.19■□□□□ 0.34
UBE2E3Q969T4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms