Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF139Q8WU17 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF139Q8WU17 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF139Q8WU17 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF139Q8WU17 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF139Q8WU17 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF139Q8WU17 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF139Q8WU17 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
RNF139Q8WU17 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF139Q8WU17 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF139Q8WU17 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF139Q8WU17 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF139Q8WU17 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF139Q8WU17 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF139Q8WU17 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF139Q8WU17 MINOS1P3-201ENST00000457048 203 ntBASIC18.77■□□□□ 0.6
RNF139Q8WU17 AC112698.1-201ENST00000510299 916 ntBASIC18.77■□□□□ 0.6
RNF139Q8WU17 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF139Q8WU17 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.77■□□□□ 0.6
RNF139Q8WU17 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF139Q8WU17 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.77■□□□□ 0.6
RNF139Q8WU17 CLEC4GP1-201ENST00000596555 870 ntBASIC18.77■□□□□ 0.6
RNF139Q8WU17 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RNF139Q8WU17 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.77■□□□□ 0.6
RNF139Q8WU17 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
RNF139Q8WU17 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
RNF139Q8WU17 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF139Q8WU17 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF139Q8WU17 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF139Q8WU17 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF139Q8WU17 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF139Q8WU17 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF139Q8WU17 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF139Q8WU17 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.77■□□□□ 0.59
RNF139Q8WU17 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF139Q8WU17 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.77■□□□□ 0.59
RNF139Q8WU17 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF139Q8WU17 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF139Q8WU17 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF139Q8WU17 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF139Q8WU17 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF139Q8WU17 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF139Q8WU17 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF139Q8WU17 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
RNF139Q8WU17 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF139Q8WU17 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF139Q8WU17 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF139Q8WU17 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF139Q8WU17 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RNF139Q8WU17 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
RNF139Q8WU17 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF139Q8WU17 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RNF139Q8WU17 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
RNF139Q8WU17 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF139Q8WU17 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF139Q8WU17 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF139Q8WU17 DUTP2-201ENST00000519164 463 ntBASIC18.76■□□□□ 0.59
RNF139Q8WU17 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF139Q8WU17 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF139Q8WU17 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF139Q8WU17 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF139Q8WU17 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF139Q8WU17 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF139Q8WU17 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF139Q8WU17 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RNF139Q8WU17 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF139Q8WU17 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF139Q8WU17 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF139Q8WU17 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF139Q8WU17 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF139Q8WU17 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF139Q8WU17 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF139Q8WU17 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF139Q8WU17 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF139Q8WU17 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 AL845331.1-201ENST00000424978 1190 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms