Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD6Q8TD26 LDHBP1-201ENST00000455730 1119 ntBASIC15.92■□□□□ 0.14
CHD6Q8TD26 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
CHD6Q8TD26 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC15.92■□□□□ 0.14
CHD6Q8TD26 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.92■□□□□ 0.14
CHD6Q8TD26 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.92■□□□□ 0.14
CHD6Q8TD26 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CHD6Q8TD26 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD6Q8TD26 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CHD6Q8TD26 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD6Q8TD26 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD6Q8TD26 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.91■□□□□ 0.14
CHD6Q8TD26 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHD6Q8TD26 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.91■□□□□ 0.14
CHD6Q8TD26 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD6Q8TD26 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHD6Q8TD26 AL024508.2-201ENST00000607749 1894 ntBASIC15.91■□□□□ 0.14
CHD6Q8TD26 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD6Q8TD26 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CHD6Q8TD26 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD6Q8TD26 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHD6Q8TD26 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CHD6Q8TD26 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CHD6Q8TD26 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHD6Q8TD26 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.91■□□□□ 0.14
CHD6Q8TD26 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.91■□□□□ 0.14
CHD6Q8TD26 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.91■□□□□ 0.14
CHD6Q8TD26 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.91■□□□□ 0.14
CHD6Q8TD26 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHD6Q8TD26 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.9■□□□□ 0.14
CHD6Q8TD26 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.9■□□□□ 0.14
CHD6Q8TD26 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHD6Q8TD26 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.9■□□□□ 0.14
CHD6Q8TD26 AL355334.1-201ENST00000417713 215 ntBASIC15.9■□□□□ 0.14
CHD6Q8TD26 RN7SL219P-201ENST00000582872 296 ntBASIC15.9■□□□□ 0.14
CHD6Q8TD26 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CHD6Q8TD26 AC132938.5-201ENST00000624980 1813 ntBASIC15.9■□□□□ 0.14
CHD6Q8TD26 TUBB1P2-201ENST00000422712 1306 ntBASIC15.9■□□□□ 0.14
CHD6Q8TD26 TUBB1P1-201ENST00000503144 1300 ntBASIC15.9■□□□□ 0.14
CHD6Q8TD26 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.9■□□□□ 0.14
CHD6Q8TD26 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.9■□□□□ 0.14
CHD6Q8TD26 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHD6Q8TD26 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHD6Q8TD26 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.9■□□□□ 0.14
CHD6Q8TD26 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CHD6Q8TD26 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHD6Q8TD26 FBXW4P1-201ENST00000426721 2239 ntBASIC15.9■□□□□ 0.14
CHD6Q8TD26 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHD6Q8TD26 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHD6Q8TD26 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CHD6Q8TD26 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHD6Q8TD26 CXCL1P1-201ENST00000502804 216 ntBASIC15.9■□□□□ 0.14
CHD6Q8TD26 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.9■□□□□ 0.14
CHD6Q8TD26 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHD6Q8TD26 AC015967.2-201ENST00000624092 234 ntBASIC15.9■□□□□ 0.14
CHD6Q8TD26 AC006435.4-201ENST00000625037 234 ntBASIC15.9■□□□□ 0.14
CHD6Q8TD26 AL356737.1-201ENST00000634391 234 ntBASIC15.9■□□□□ 0.14
CHD6Q8TD26 AL353593.2-201ENST00000602529 1483 ntBASIC15.9■□□□□ 0.14
CHD6Q8TD26 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHD6Q8TD26 GUSBP5-202ENST00000510805 1989 ntBASIC15.9■□□□□ 0.14
CHD6Q8TD26 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHD6Q8TD26 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHD6Q8TD26 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHD6Q8TD26 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CHD6Q8TD26 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.9■□□□□ 0.14
CHD6Q8TD26 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHD6Q8TD26 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.89■□□□□ 0.14
CHD6Q8TD26 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.89■□□□□ 0.14
CHD6Q8TD26 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.89■□□□□ 0.13
CHD6Q8TD26 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 AL020989.1-201ENST00000422979 469 ntBASIC15.89■□□□□ 0.13
CHD6Q8TD26 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.89■□□□□ 0.13
CHD6Q8TD26 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.89■□□□□ 0.13
CHD6Q8TD26 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.89■□□□□ 0.13
CHD6Q8TD26 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.89■□□□□ 0.13
CHD6Q8TD26 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CHD6Q8TD26 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
CHD6Q8TD26 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CHD6Q8TD26 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CHD6Q8TD26 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.89■□□□□ 0.13
CHD6Q8TD26 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD6Q8TD26 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CHD6Q8TD26 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms