Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AL353593.2-201ENST00000602529 1483 ntBASIC13.86□□□□□ -0.19
LINC01006Q8NI28 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 SIRPAP1-201ENST00000448467 1770 ntBASIC13.86□□□□□ -0.19
LINC01006Q8NI28 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 AC004706.3-202ENST00000621574 984 ntBASIC13.85□□□□□ -0.19
LINC01006Q8NI28 AC134684.3-201ENST00000641758 218 ntBASIC13.85□□□□□ -0.19
LINC01006Q8NI28 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 AC073592.3-201ENST00000625118 1834 ntBASIC13.85□□□□□ -0.19
LINC01006Q8NI28 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC01006Q8NI28 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 PMS2P2-201ENST00000425039 1128 ntBASIC13.84□□□□□ -0.19
LINC01006Q8NI28 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01006Q8NI28 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01006Q8NI28 AL049757.1-201ENST00000616842 1596 ntBASIC13.83□□□□□ -0.19
LINC01006Q8NI28 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01006Q8NI28 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01006Q8NI28 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms