Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 GPR32P1-201ENST00000601788 811 ntBASIC18.37■□□□□ 0.53
PAF1Q8N7H5 AC069148.1-201ENST00000608741 768 ntBASIC18.37■□□□□ 0.53
PAF1Q8N7H5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PAF1Q8N7H5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 SPDYE13P-201ENST00000445314 798 ntBASIC18.36■□□□□ 0.53
PAF1Q8N7H5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 AC005332.3-201ENST00000589904 676 ntBASIC18.36■□□□□ 0.53
PAF1Q8N7H5 AL024508.2-201ENST00000607749 1894 ntBASIC18.36■□□□□ 0.53
PAF1Q8N7H5 AL121672.3-201ENST00000608644 468 ntBASIC18.36■□□□□ 0.53
PAF1Q8N7H5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PAF1Q8N7H5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.35■□□□□ 0.53
PAF1Q8N7H5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PAF1Q8N7H5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PAF1Q8N7H5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PAF1Q8N7H5 LINC01126-201ENST00000623515 1646 ntBASIC18.34■□□□□ 0.53
PAF1Q8N7H5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PAF1Q8N7H5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PAF1Q8N7H5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PAF1Q8N7H5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.34■□□□□ 0.53
PAF1Q8N7H5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PAF1Q8N7H5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PAF1Q8N7H5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PAF1Q8N7H5 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms