Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
XRN1Q8IZH2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC24.6■■□□□ 1.53
XRN1Q8IZH2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
XRN1Q8IZH2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
XRN1Q8IZH2 PC-208ENST00000529047 1607 ntTSL 3 BASIC24.6■■□□□ 1.53
XRN1Q8IZH2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC24.59■■□□□ 1.53
XRN1Q8IZH2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
XRN1Q8IZH2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
XRN1Q8IZH2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
XRN1Q8IZH2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
XRN1Q8IZH2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC24.59■■□□□ 1.53
XRN1Q8IZH2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
XRN1Q8IZH2 AL627223.1-201ENST00000416693 442 ntBASIC24.59■■□□□ 1.53
XRN1Q8IZH2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
XRN1Q8IZH2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC24.59■■□□□ 1.53
XRN1Q8IZH2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC24.59■■□□□ 1.53
XRN1Q8IZH2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
XRN1Q8IZH2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC24.59■■□□□ 1.53
XRN1Q8IZH2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
XRN1Q8IZH2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
XRN1Q8IZH2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
XRN1Q8IZH2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
XRN1Q8IZH2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
XRN1Q8IZH2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
XRN1Q8IZH2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
XRN1Q8IZH2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC24.58■■□□□ 1.53
XRN1Q8IZH2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
XRN1Q8IZH2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
XRN1Q8IZH2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
XRN1Q8IZH2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
XRN1Q8IZH2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
XRN1Q8IZH2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
XRN1Q8IZH2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC24.58■■□□□ 1.53
XRN1Q8IZH2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC24.58■■□□□ 1.53
XRN1Q8IZH2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
XRN1Q8IZH2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC24.58■■□□□ 1.53
XRN1Q8IZH2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
XRN1Q8IZH2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
XRN1Q8IZH2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC24.58■■□□□ 1.53
XRN1Q8IZH2 CD99-202ENST00000381180 530 ntTSL 2 BASIC24.58■■□□□ 1.52
XRN1Q8IZH2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.52
XRN1Q8IZH2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC24.58■■□□□ 1.52
XRN1Q8IZH2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC24.58■■□□□ 1.52
XRN1Q8IZH2 AC007064.4-201ENST00000637740 555 ntBASIC24.58■■□□□ 1.52
XRN1Q8IZH2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC24.58■■□□□ 1.52
XRN1Q8IZH2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC24.58■■□□□ 1.52
XRN1Q8IZH2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 DDT-204ENST00000404092 805 ntTSL 3 BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 Z92544.3-201ENST00000624747 417 ntBASIC24.57■■□□□ 1.52
XRN1Q8IZH2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
XRN1Q8IZH2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC24.56■■□□□ 1.52
XRN1Q8IZH2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC24.56■■□□□ 1.52
XRN1Q8IZH2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
XRN1Q8IZH2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC24.56■■□□□ 1.52
XRN1Q8IZH2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
XRN1Q8IZH2 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC24.56■■□□□ 1.52
XRN1Q8IZH2 CXCL1P1-201ENST00000502804 216 ntBASIC24.56■■□□□ 1.52
XRN1Q8IZH2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC24.56■■□□□ 1.52
XRN1Q8IZH2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC24.56■■□□□ 1.52
XRN1Q8IZH2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC24.56■■□□□ 1.52
XRN1Q8IZH2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
XRN1Q8IZH2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
XRN1Q8IZH2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
XRN1Q8IZH2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
XRN1Q8IZH2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
XRN1Q8IZH2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
XRN1Q8IZH2 AC126763.1-201ENST00000552015 2118 ntBASIC24.56■■□□□ 1.52
XRN1Q8IZH2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC24.56■■□□□ 1.52
XRN1Q8IZH2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 ACTL9-202ENST00000612068 1252 ntBASIC24.55■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms