Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC22.1■■□□□ 1.13
SMC5Q8IY18 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMC5Q8IY18 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC22.1■■□□□ 1.13
SMC5Q8IY18 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC22.1■■□□□ 1.13
SMC5Q8IY18 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMC5Q8IY18 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMC5Q8IY18 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMC5Q8IY18 AC096633.1-201ENST00000422446 749 ntBASIC22.1■■□□□ 1.13
SMC5Q8IY18 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.1■■□□□ 1.13
SMC5Q8IY18 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SMC5Q8IY18 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC22.1■■□□□ 1.13
SMC5Q8IY18 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMC5Q8IY18 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMC5Q8IY18 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMC5Q8IY18 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SMC5Q8IY18 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC22.1■■□□□ 1.13
SMC5Q8IY18 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
SMC5Q8IY18 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
SMC5Q8IY18 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SMC5Q8IY18 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMC5Q8IY18 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMC5Q8IY18 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC22.1■■□□□ 1.13
SMC5Q8IY18 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMC5Q8IY18 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC22.09■■□□□ 1.13
SMC5Q8IY18 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
SMC5Q8IY18 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMC5Q8IY18 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
SMC5Q8IY18 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMC5Q8IY18 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMC5Q8IY18 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
SMC5Q8IY18 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC22.09■■□□□ 1.13
SMC5Q8IY18 LINC01311-201ENST00000565162 1445 ntBASIC22.09■■□□□ 1.13
SMC5Q8IY18 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
SMC5Q8IY18 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC22.09■■□□□ 1.13
SMC5Q8IY18 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMC5Q8IY18 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC22.09■■□□□ 1.13
SMC5Q8IY18 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMC5Q8IY18 LTBR-211ENST00000543190 785 ntTSL 3 BASIC22.09■■□□□ 1.13
SMC5Q8IY18 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMC5Q8IY18 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMC5Q8IY18 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMC5Q8IY18 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMC5Q8IY18 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
SMC5Q8IY18 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMC5Q8IY18 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SMC5Q8IY18 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMC5Q8IY18 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMC5Q8IY18 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMC5Q8IY18 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SMC5Q8IY18 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMC5Q8IY18 BX276092.7-203ENST00000637198 1536 ntBASIC22.08■■□□□ 1.13
SMC5Q8IY18 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SMC5Q8IY18 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMC5Q8IY18 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SMC5Q8IY18 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SMC5Q8IY18 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.08■■□□□ 1.13
SMC5Q8IY18 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMC5Q8IY18 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMC5Q8IY18 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC22.08■■□□□ 1.13
SMC5Q8IY18 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SMC5Q8IY18 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SMC5Q8IY18 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SMC5Q8IY18 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SMC5Q8IY18 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC22.08■■□□□ 1.12
SMC5Q8IY18 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
SMC5Q8IY18 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMC5Q8IY18 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMC5Q8IY18 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
SMC5Q8IY18 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC22.07■■□□□ 1.12
SMC5Q8IY18 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMC5Q8IY18 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC22.07■■□□□ 1.12
SMC5Q8IY18 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
SMC5Q8IY18 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
SMC5Q8IY18 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SMC5Q8IY18 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SMC5Q8IY18 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC22.07■■□□□ 1.12
SMC5Q8IY18 RCN1P1-201ENST00000400413 996 ntBASIC22.07■■□□□ 1.12
SMC5Q8IY18 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC22.07■■□□□ 1.12
SMC5Q8IY18 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC22.07■■□□□ 1.12
SMC5Q8IY18 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.07■■□□□ 1.12
SMC5Q8IY18 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
SMC5Q8IY18 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMC5Q8IY18 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
SMC5Q8IY18 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMC5Q8IY18 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SMC5Q8IY18 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC22.07■■□□□ 1.12
SMC5Q8IY18 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
SMC5Q8IY18 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC22.06■■□□□ 1.12
SMC5Q8IY18 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC22.06■■□□□ 1.12
SMC5Q8IY18 Z83836.1-201ENST00000624605 1642 ntBASIC22.06■■□□□ 1.12
SMC5Q8IY18 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMC5Q8IY18 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
SMC5Q8IY18 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMC5Q8IY18 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
SMC5Q8IY18 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMC5Q8IY18 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMC5Q8IY18 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22.06■■□□□ 1.12
SMC5Q8IY18 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMC5Q8IY18 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC22.06■■□□□ 1.12
SMC5Q8IY18 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms