Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX6Q8HWS3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
RFX6Q8HWS3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 AC117947.1-201ENST00000427448 529 ntBASIC18.62■□□□□ 0.57
RFX6Q8HWS3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFX6Q8HWS3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 AC073508.3-201ENST00000619697 1419 ntBASIC18.61■□□□□ 0.57
RFX6Q8HWS3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 STARP1-201ENST00000397973 869 ntBASIC18.61■□□□□ 0.57
RFX6Q8HWS3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 AC211429.1-201ENST00000415277 523 ntBASIC18.61■□□□□ 0.57
RFX6Q8HWS3 KRT18P48-201ENST00000434763 852 ntBASIC18.61■□□□□ 0.57
RFX6Q8HWS3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RFX6Q8HWS3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 KRT89P-201ENST00000620027 1478 ntBASIC18.6■□□□□ 0.57
RFX6Q8HWS3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 AC092597.1-201ENST00000487352 616 ntBASIC18.6■□□□□ 0.57
RFX6Q8HWS3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RFX6Q8HWS3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms