Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 AC068137.2-201ENST00000605408 478 ntBASIC22.29■■□□□ 1.16
COL23A1Q86Y22 GGTLC5P-201ENST00000617623 998 ntBASIC22.29■■□□□ 1.16
COL23A1Q86Y22 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 AC092919.2-201ENST00000623631 1645 ntBASIC22.28■■□□□ 1.16
COL23A1Q86Y22 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 AC236430.1-201ENST00000402231 743 ntBASIC22.28■■□□□ 1.16
COL23A1Q86Y22 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 AC005225.4-201ENST00000557330 545 ntBASIC22.28■■□□□ 1.16
COL23A1Q86Y22 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL23A1Q86Y22 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 HNRNPFP1-201ENST00000391730 1133 ntBASIC22.27■■□□□ 1.16
COL23A1Q86Y22 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 INGX-202ENST00000489074 768 ntBASIC22.27■■□□□ 1.16
COL23A1Q86Y22 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 MED16-214ENST00000617672 554 ntTSL 5 BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL23A1Q86Y22 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 GMCL1P1-201ENST00000463439 1581 ntBASIC22.26■■□□□ 1.15
COL23A1Q86Y22 AC006116.8-202ENST00000587620 1550 ntBASIC22.26■■□□□ 1.15
COL23A1Q86Y22 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 AC003669.1-201ENST00000334569 611 ntBASIC22.26■■□□□ 1.15
COL23A1Q86Y22 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 ADH5P3-201ENST00000433842 1137 ntBASIC22.26■■□□□ 1.15
COL23A1Q86Y22 AC002472.2-201ENST00000442739 958 ntBASIC22.26■■□□□ 1.15
COL23A1Q86Y22 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 POLD4-211ENST00000539074 714 ntTSL 3 BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 RN7SL204P-201ENST00000582831 262 ntBASIC22.26■■□□□ 1.15
COL23A1Q86Y22 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL23A1Q86Y22 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
COL23A1Q86Y22 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms