Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.64■□□□□ 0.09
C11orf88Q6PI97 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
C11orf88Q6PI97 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.64■□□□□ 0.09
C11orf88Q6PI97 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
C11orf88Q6PI97 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 TUBB8P6-201ENST00000436895 1288 ntBASIC15.63■□□□□ 0.09
C11orf88Q6PI97 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.63■□□□□ 0.09
C11orf88Q6PI97 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 AP003071.4-201ENST00000562276 1284 ntBASIC15.62■□□□□ 0.09
C11orf88Q6PI97 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.62■□□□□ 0.09
C11orf88Q6PI97 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 REXO1L9P-201ENST00000604264 2108 ntBASIC15.61■□□□□ 0.09
C11orf88Q6PI97 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 AL356309.3-201ENST00000624132 1934 ntBASIC15.61■□□□□ 0.09
C11orf88Q6PI97 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms