Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 RPL13AP19-201ENST00000434320 584 ntBASIC9.66□□□□□ -0.86
UBR4Q5T4S7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 UXT-AS1-201ENST00000590504 1525 ntBASIC9.65□□□□□ -0.86
UBR4Q5T4S7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 AC093525.8-201ENST00000624099 1342 ntBASIC9.65□□□□□ -0.86
UBR4Q5T4S7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 SLC25A24P2-201ENST00000415059 510 ntBASIC9.65□□□□□ -0.86
UBR4Q5T4S7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 RNA5SP412-201ENST00000516234 123 ntBASIC9.65□□□□□ -0.86
UBR4Q5T4S7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 AL020989.1-201ENST00000422979 469 ntBASIC9.65□□□□□ -0.86
UBR4Q5T4S7 AC241585.1-201ENST00000433527 519 ntBASIC9.65□□□□□ -0.86
UBR4Q5T4S7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 RN7SL818P-201ENST00000485099 259 ntBASIC9.65□□□□□ -0.86
UBR4Q5T4S7 FAM86C2P-203ENST00000528684 1004 ntBASIC9.65□□□□□ -0.86
UBR4Q5T4S7 AC243562.1-201ENST00000560672 389 ntBASIC9.65□□□□□ -0.86
UBR4Q5T4S7 RN7SL725P-201ENST00000606439 259 ntBASIC9.65□□□□□ -0.86
UBR4Q5T4S7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBR4Q5T4S7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
UBR4Q5T4S7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
UBR4Q5T4S7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC9.65□□□□□ -0.87
UBR4Q5T4S7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
UBR4Q5T4S7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
UBR4Q5T4S7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC9.65□□□□□ -0.87
UBR4Q5T4S7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
UBR4Q5T4S7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
UBR4Q5T4S7 BRWD1P1-201ENST00000401091 371 ntBASIC9.65□□□□□ -0.87
UBR4Q5T4S7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC9.65□□□□□ -0.87
UBR4Q5T4S7 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC9.65□□□□□ -0.87
UBR4Q5T4S7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC9.65□□□□□ -0.87
UBR4Q5T4S7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC9.65□□□□□ -0.87
UBR4Q5T4S7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC9.65□□□□□ -0.87
UBR4Q5T4S7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 MIR33B-201ENST00000385104 96 ntBASIC9.64□□□□□ -0.87
UBR4Q5T4S7 MIR1227-201ENST00000408484 88 ntBASIC9.64□□□□□ -0.87
UBR4Q5T4S7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 AC007064.4-201ENST00000637740 555 ntBASIC9.64□□□□□ -0.87
UBR4Q5T4S7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms