Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
ATP13A4Q4VNC1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
ATP13A4Q4VNC1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATP13A4Q4VNC1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 FAM8A6P-201ENST00000407496 1135 ntBASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 SPDYE13P-201ENST00000445314 798 ntBASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 REXO1L11P-201ENST00000620964 1927 ntBASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP13A4Q4VNC1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 IGHGP-201ENST00000390555 1178 ntBASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 HOMER2P1-201ENST00000455653 964 ntBASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 AP003733.1-201ENST00000491725 852 ntBASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 RNF126P1-202ENST00000569893 925 ntBASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP13A4Q4VNC1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 AC080080.1-201ENST00000625121 2420 ntBASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 ZNF444P1-201ENST00000559497 298 ntBASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 LINC01311-201ENST00000565162 1445 ntBASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A4Q4VNC1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP13A4Q4VNC1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP13A4Q4VNC1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms