Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 AC005336.2-201ENST00000593183 939 ntBASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 NPAP1P7-201ENST00000613027 823 ntBASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE4Q2TBC4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 ATP5G2P1-201ENST00000433580 426 ntBASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 AC091607.1-201ENST00000490318 1060 ntBASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 MIR3180-1-201ENST00000580374 94 ntBASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 MIR3180-3-201ENST00000584616 94 ntBASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 AC125634.1-201ENST00000438758 1403 ntBASIC16.62■□□□□ 0.25
PRICKLE4Q2TBC4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 AP005901.3-202ENST00000581653 237 ntBASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 AL138831.2-201ENST00000606564 490 ntBASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.61■□□□□ 0.25
PRICKLE4Q2TBC4 AC233702.3-201ENST00000578656 1387 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms