Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.08■□□□□ 0.65
CTC1Q2NKJ3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
CTC1Q2NKJ3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTC1Q2NKJ3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTC1Q2NKJ3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.08■□□□□ 0.65
CTC1Q2NKJ3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.08■□□□□ 0.65
CTC1Q2NKJ3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
CTC1Q2NKJ3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTC1Q2NKJ3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTC1Q2NKJ3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.08■□□□□ 0.65
CTC1Q2NKJ3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 MIR3197-201ENST00000582241 73 ntBASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 AC107918.4-202ENST00000641623 219 ntBASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTC1Q2NKJ3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 MTCL1P1-201ENST00000446207 792 ntBASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 MTDHP5-201ENST00000598980 586 ntBASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CTC1Q2NKJ3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms