Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PRAMEP78395 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.06■□□□□ 0.48
PRAMEP78395 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 KRT18P48-201ENST00000434763 852 ntBASIC18.06■□□□□ 0.48
PRAMEP78395 AL359075.1-203ENST00000462729 1002 ntBASIC18.06■□□□□ 0.48
PRAMEP78395 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.06■□□□□ 0.48
PRAMEP78395 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.06■□□□□ 0.48
PRAMEP78395 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.06■□□□□ 0.48
PRAMEP78395 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PRAMEP78395 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.06■□□□□ 0.48
PRAMEP78395 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.06■□□□□ 0.48
PRAMEP78395 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEP78395 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.05■□□□□ 0.48
PRAMEP78395 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PRAMEP78395 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEP78395 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.05■□□□□ 0.48
PRAMEP78395 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEP78395 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
PRAMEP78395 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.05■□□□□ 0.48
PRAMEP78395 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEP78395 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEP78395 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
PRAMEP78395 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.05■□□□□ 0.48
PRAMEP78395 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.05■□□□□ 0.48
PRAMEP78395 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEP78395 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PRAMEP78395 HLA-F-220ENST00000434407 884 ntBASIC18.05■□□□□ 0.48
PRAMEP78395 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.05■□□□□ 0.48
PRAMEP78395 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PRAMEP78395 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
PRAMEP78395 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEP78395 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEP78395 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PRAMEP78395 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEP78395 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEP78395 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEP78395 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEP78395 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEP78395 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEP78395 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEP78395 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.04■□□□□ 0.48
PRAMEP78395 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.04■□□□□ 0.48
PRAMEP78395 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PRAMEP78395 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PRAMEP78395 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEP78395 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PRAMEP78395 AC012317.2-201ENST00000623305 2251 ntBASIC18.04■□□□□ 0.48
PRAMEP78395 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEP78395 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEP78395 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEP78395 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.04■□□□□ 0.48
PRAMEP78395 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEP78395 AC092597.1-201ENST00000487352 616 ntBASIC18.04■□□□□ 0.48
PRAMEP78395 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.04■□□□□ 0.48
PRAMEP78395 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.04■□□□□ 0.48
PRAMEP78395 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEP78395 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
PRAMEP78395 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.04■□□□□ 0.48
PRAMEP78395 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEP78395 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.04■□□□□ 0.48
PRAMEP78395 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEP78395 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEP78395 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEP78395 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEP78395 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEP78395 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEP78395 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEP78395 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.04■□□□□ 0.48
PRAMEP78395 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
PRAMEP78395 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEP78395 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEP78395 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.03■□□□□ 0.48
PRAMEP78395 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEP78395 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEP78395 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PRAMEP78395 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEP78395 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEP78395 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEP78395 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEP78395 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEP78395 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEP78395 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms