Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN6P56747 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN6P56747 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN6P56747 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN6P56747 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN6P56747 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN6P56747 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN6P56747 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLDN6P56747 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN6P56747 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLDN6P56747 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CLDN6P56747 AC073621.1-201ENST00000392730 636 ntBASIC17.11■□□□□ 0.33
CLDN6P56747 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN6P56747 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN6P56747 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN6P56747 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
CLDN6P56747 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN6P56747 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN6P56747 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN6P56747 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CLDN6P56747 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.11■□□□□ 0.33
CLDN6P56747 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN6P56747 MIR1199-201ENST00000621445 119 ntBASIC17.11■□□□□ 0.33
CLDN6P56747 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN6P56747 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN6P56747 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN6P56747 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CLDN6P56747 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN6P56747 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN6P56747 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN6P56747 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN6P56747 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN6P56747 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN6P56747 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN6P56747 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN6P56747 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLDN6P56747 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN6P56747 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN6P56747 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN6P56747 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN6P56747 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CLDN6P56747 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN6P56747 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLDN6P56747 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN6P56747 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN6P56747 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN6P56747 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.1■□□□□ 0.33
CLDN6P56747 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLDN6P56747 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.1■□□□□ 0.33
CLDN6P56747 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN6P56747 KRT18P27-201ENST00000427733 1299 ntBASIC17.1■□□□□ 0.33
CLDN6P56747 AP006288.1-201ENST00000446065 395 ntBASIC17.1■□□□□ 0.33
CLDN6P56747 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN6P56747 CYMP-203ENST00000474680 1263 ntBASIC17.1■□□□□ 0.33
CLDN6P56747 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN6P56747 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CLDN6P56747 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN6P56747 AC005593.1-201ENST00000624894 515 ntBASIC17.1■□□□□ 0.33
CLDN6P56747 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN6P56747 AL022326.1-202ENST00000641533 845 ntBASIC17.1■□□□□ 0.33
CLDN6P56747 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
CLDN6P56747 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN6P56747 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN6P56747 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN6P56747 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLDN6P56747 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN6P56747 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CLDN6P56747 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN6P56747 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CLDN6P56747 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLDN6P56747 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN6P56747 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN6P56747 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN6P56747 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN6P56747 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLDN6P56747 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN6P56747 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CLDN6P56747 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN6P56747 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN6P56747 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN6P56747 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.09■□□□□ 0.33
CLDN6P56747 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN6P56747 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN6P56747 RFPL4AP1-201ENST00000530883 850 ntBASIC17.09■□□□□ 0.33
CLDN6P56747 SNHG9-202ENST00000564014 471 ntBASIC17.09■□□□□ 0.33
CLDN6P56747 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN6P56747 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN6P56747 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLDN6P56747 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN6P56747 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CLDN6P56747 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN6P56747 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN6P56747 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN6P56747 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN6P56747 HCG11-201ENST00000411553 5696 ntBASIC17.09■□□□□ 0.33
CLDN6P56747 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN6P56747 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.08■□□□□ 0.33
CLDN6P56747 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN6P56747 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.08■□□□□ 0.33
CLDN6P56747 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms