Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.7■□□□□ 0.74
PEX3P56589 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PEX3P56589 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PEX3P56589 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.7■□□□□ 0.74
PEX3P56589 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PEX3P56589 NOC2LP1-202ENST00000452600 2235 ntBASIC19.7■□□□□ 0.74
PEX3P56589 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PEX3P56589 AC018470.1-201ENST00000624790 3129 ntBASIC19.69■□□□□ 0.74
PEX3P56589 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PEX3P56589 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.69■□□□□ 0.74
PEX3P56589 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PEX3P56589 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PEX3P56589 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PEX3P56589 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PEX3P56589 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PEX3P56589 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PEX3P56589 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PEX3P56589 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PEX3P56589 NUS1P1-201ENST00000446295 882 ntBASIC19.69■□□□□ 0.74
PEX3P56589 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.69■□□□□ 0.74
PEX3P56589 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.69■□□□□ 0.74
PEX3P56589 BNIP3P18-201ENST00000593976 575 ntBASIC19.69■□□□□ 0.74
PEX3P56589 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PEX3P56589 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PEX3P56589 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PEX3P56589 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PEX3P56589 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PEX3P56589 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
PEX3P56589 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PEX3P56589 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PEX3P56589 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PEX3P56589 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PEX3P56589 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PEX3P56589 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.69■□□□□ 0.74
PEX3P56589 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PEX3P56589 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PEX3P56589 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.68■□□□□ 0.74
PEX3P56589 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PEX3P56589 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.68■□□□□ 0.74
PEX3P56589 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PEX3P56589 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PEX3P56589 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
PEX3P56589 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PEX3P56589 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PEX3P56589 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.68■□□□□ 0.74
PEX3P56589 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.68■□□□□ 0.74
PEX3P56589 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.68■□□□□ 0.74
PEX3P56589 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.68■□□□□ 0.74
PEX3P56589 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PEX3P56589 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.68■□□□□ 0.74
PEX3P56589 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.68■□□□□ 0.74
PEX3P56589 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PEX3P56589 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PEX3P56589 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PEX3P56589 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PEX3P56589 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
PEX3P56589 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
PEX3P56589 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PEX3P56589 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PEX3P56589 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PEX3P56589 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PEX3P56589 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.67■□□□□ 0.74
PEX3P56589 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PEX3P56589 HTR7P1-202ENST00000624664 4411 ntBASIC19.67■□□□□ 0.74
PEX3P56589 AC009949.1-201ENST00000623048 1830 ntBASIC19.67■□□□□ 0.74
PEX3P56589 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PEX3P56589 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.67■□□□□ 0.74
PEX3P56589 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PEX3P56589 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PEX3P56589 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.67■□□□□ 0.74
PEX3P56589 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PEX3P56589 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PEX3P56589 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PEX3P56589 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.67■□□□□ 0.74
PEX3P56589 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PEX3P56589 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PEX3P56589 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PEX3P56589 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PEX3P56589 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.67■□□□□ 0.74
PEX3P56589 DUSP5P1-201ENST00000441325 1139 ntBASIC19.67■□□□□ 0.74
PEX3P56589 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.67■□□□□ 0.74
PEX3P56589 AC096582.2-201ENST00000510860 516 ntBASIC19.67■□□□□ 0.74
PEX3P56589 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.67■□□□□ 0.74
PEX3P56589 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.67■□□□□ 0.74
PEX3P56589 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.67■□□□□ 0.74
PEX3P56589 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.67■□□□□ 0.74
PEX3P56589 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.67■□□□□ 0.74
PEX3P56589 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.67■□□□□ 0.74
PEX3P56589 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PEX3P56589 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
PEX3P56589 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PEX3P56589 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PEX3P56589 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.67■□□□□ 0.74
PEX3P56589 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PEX3P56589 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.66■□□□□ 0.74
PEX3P56589 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PEX3P56589 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.66■□□□□ 0.74
PEX3P56589 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.66■□□□□ 0.74
PEX3P56589 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PEX3P56589 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms