Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH15P55291 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH15P55291 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH15P55291 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH15P55291 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH15P55291 KRT17P2-201ENST00000300992 1314 ntBASIC16.71■□□□□ 0.27
CDH15P55291 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CDH15P55291 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH15P55291 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH15P55291 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH15P55291 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH15P55291 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CDH15P55291 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH15P55291 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH15P55291 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH15P55291 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH15P55291 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH15P55291 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDH15P55291 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH15P55291 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH15P55291 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH15P55291 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH15P55291 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH15P55291 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH15P55291 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH15P55291 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH15P55291 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH15P55291 AL513477.1-201ENST00000602865 2407 ntBASIC16.71■□□□□ 0.27
CDH15P55291 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
CDH15P55291 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH15P55291 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH15P55291 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
CDH15P55291 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CDH15P55291 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CDH15P55291 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CDH15P55291 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CDH15P55291 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH15P55291 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH15P55291 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.7■□□□□ 0.26
CDH15P55291 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH15P55291 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.7■□□□□ 0.26
CDH15P55291 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.7■□□□□ 0.26
CDH15P55291 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH15P55291 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CDH15P55291 AL049637.2-201ENST00000641778 930 ntBASIC16.7■□□□□ 0.26
CDH15P55291 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CDH15P55291 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CDH15P55291 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH15P55291 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH15P55291 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH15P55291 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH15P55291 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.69■□□□□ 0.26
CDH15P55291 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDH15P55291 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH15P55291 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CDH15P55291 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CDH15P55291 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH15P55291 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH15P55291 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH15P55291 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH15P55291 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH15P55291 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH15P55291 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH15P55291 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH15P55291 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH15P55291 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDH15P55291 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDH15P55291 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH15P55291 TSPY7P-201ENST00000431358 1114 ntBASIC16.69■□□□□ 0.26
CDH15P55291 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH15P55291 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH15P55291 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CDH15P55291 RARRES2P10-201ENST00000564312 460 ntBASIC16.69■□□□□ 0.26
CDH15P55291 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH15P55291 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH15P55291 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH15P55291 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CDH15P55291 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDH15P55291 REXO1L12P-201ENST00000622156 912 ntBASIC16.69■□□□□ 0.26
CDH15P55291 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms