Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CLTCL1P53675 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC25.41■■□□□ 1.66
CLTCL1P53675 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC25.41■■□□□ 1.66
CLTCL1P53675 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC25.41■■□□□ 1.66
CLTCL1P53675 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
CLTCL1P53675 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC25.41■■□□□ 1.66
CLTCL1P53675 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC25.41■■□□□ 1.66
CLTCL1P53675 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CLTCL1P53675 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
CLTCL1P53675 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CLTCL1P53675 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC25.4■■□□□ 1.66
CLTCL1P53675 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CLTCL1P53675 GPR89P-201ENST00000407924 1495 ntBASIC25.4■■□□□ 1.66
CLTCL1P53675 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC25.4■■□□□ 1.66
CLTCL1P53675 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CLTCL1P53675 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CLTCL1P53675 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CLTCL1P53675 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC25.4■■□□□ 1.66
CLTCL1P53675 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CLTCL1P53675 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC25.4■■□□□ 1.66
CLTCL1P53675 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC25.4■■□□□ 1.66
CLTCL1P53675 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
CLTCL1P53675 STK19B-204ENST00000512515 211 ntBASIC25.4■■□□□ 1.66
CLTCL1P53675 POLD4-207ENST00000531239 584 ntTSL 2 BASIC25.4■■□□□ 1.66
CLTCL1P53675 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC25.4■■□□□ 1.66
CLTCL1P53675 TNXA-203ENST00000507684 2038 ntBASIC25.4■■□□□ 1.66
CLTCL1P53675 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC25.4■■□□□ 1.66
CLTCL1P53675 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CLTCL1P53675 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CLTCL1P53675 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CLTCL1P53675 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CLTCL1P53675 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC25.39■■□□□ 1.66
CLTCL1P53675 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC25.39■■□□□ 1.66
CLTCL1P53675 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CLTCL1P53675 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC25.39■■□□□ 1.66
CLTCL1P53675 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC25.39■■□□□ 1.66
CLTCL1P53675 GGCT-205ENST00000409436 954 ntTSL 3 BASIC25.39■■□□□ 1.66
CLTCL1P53675 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC25.39■■□□□ 1.66
CLTCL1P53675 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CLTCL1P53675 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC25.39■■□□□ 1.66
CLTCL1P53675 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CLTCL1P53675 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC25.39■■□□□ 1.65
CLTCL1P53675 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC25.39■■□□□ 1.65
CLTCL1P53675 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CLTCL1P53675 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC25.38■■□□□ 1.65
CLTCL1P53675 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC25.38■■□□□ 1.65
CLTCL1P53675 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CLTCL1P53675 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CLTCL1P53675 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC25.38■■□□□ 1.65
CLTCL1P53675 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC25.38■■□□□ 1.65
CLTCL1P53675 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CLTCL1P53675 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CLTCL1P53675 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CLTCL1P53675 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CLTCL1P53675 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
CLTCL1P53675 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CLTCL1P53675 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
CLTCL1P53675 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLTCL1P53675 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC25.37■■□□□ 1.65
CLTCL1P53675 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC25.37■■□□□ 1.65
CLTCL1P53675 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CLTCL1P53675 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC25.37■■□□□ 1.65
CLTCL1P53675 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLTCL1P53675 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
CLTCL1P53675 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC25.37■■□□□ 1.65
CLTCL1P53675 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
CLTCL1P53675 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLTCL1P53675 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC25.37■■□□□ 1.65
CLTCL1P53675 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLTCL1P53675 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC25.37■■□□□ 1.65
CLTCL1P53675 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC25.37■■□□□ 1.65
CLTCL1P53675 EFTUD1P1-204ENST00000560401 1798 ntBASIC25.37■■□□□ 1.65
CLTCL1P53675 BX323043.1-201ENST00000641006 1765 ntBASIC25.37■■□□□ 1.65
CLTCL1P53675 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
CLTCL1P53675 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLTCL1P53675 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
CLTCL1P53675 AC002558.1-201ENST00000488906 803 ntBASIC25.37■■□□□ 1.65
CLTCL1P53675 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
CLTCL1P53675 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC25.37■■□□□ 1.65
CLTCL1P53675 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC25.37■■□□□ 1.65
CLTCL1P53675 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC25.37■■□□□ 1.65
CLTCL1P53675 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLTCL1P53675 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLTCL1P53675 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLTCL1P53675 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLTCL1P53675 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
CLTCL1P53675 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLTCL1P53675 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
CLTCL1P53675 MADD-208ENST00000405573 1823 ntTSL 5 BASIC25.36■■□□□ 1.65
CLTCL1P53675 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
CLTCL1P53675 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CLTCL1P53675 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLTCL1P53675 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLTCL1P53675 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLTCL1P53675 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CLTCL1P53675 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
CLTCL1P53675 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC25.36■■□□□ 1.65
CLTCL1P53675 CRYGEP-201ENST00000412192 528 ntBASIC25.36■■□□□ 1.65
CLTCL1P53675 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CLTCL1P53675 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms