Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KNTC1P50748 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.93■□□□□ 0.3
KNTC1P50748 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
KNTC1P50748 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KNTC1P50748 AC007967.3-201ENST00000434308 558 ntBASIC16.93■□□□□ 0.3
KNTC1P50748 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KNTC1P50748 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.93■□□□□ 0.3
KNTC1P50748 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.93■□□□□ 0.3
KNTC1P50748 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
KNTC1P50748 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.93■□□□□ 0.3
KNTC1P50748 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.93■□□□□ 0.3
KNTC1P50748 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
KNTC1P50748 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KNTC1P50748 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.93■□□□□ 0.3
KNTC1P50748 NCF1C-201ENST00000438382 1427 ntBASIC16.92■□□□□ 0.3
KNTC1P50748 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KNTC1P50748 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
KNTC1P50748 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.92■□□□□ 0.3
KNTC1P50748 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.92■□□□□ 0.3
KNTC1P50748 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KNTC1P50748 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KNTC1P50748 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KNTC1P50748 AC103564.2-201ENST00000432853 1299 ntBASIC16.92■□□□□ 0.3
KNTC1P50748 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
KNTC1P50748 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KNTC1P50748 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
KNTC1P50748 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.92■□□□□ 0.3
KNTC1P50748 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KNTC1P50748 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KNTC1P50748 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KNTC1P50748 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KNTC1P50748 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.92■□□□□ 0.3
KNTC1P50748 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KNTC1P50748 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KNTC1P50748 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KNTC1P50748 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
KNTC1P50748 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KNTC1P50748 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.92■□□□□ 0.3
KNTC1P50748 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.92■□□□□ 0.3
KNTC1P50748 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.92■□□□□ 0.3
KNTC1P50748 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KNTC1P50748 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.92■□□□□ 0.3
KNTC1P50748 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.92■□□□□ 0.3
KNTC1P50748 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KNTC1P50748 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KNTC1P50748 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.92■□□□□ 0.3
KNTC1P50748 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.91■□□□□ 0.3
KNTC1P50748 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
KNTC1P50748 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 AP002472.1-201ENST00000577490 586 ntBASIC16.91■□□□□ 0.3
KNTC1P50748 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.91■□□□□ 0.3
KNTC1P50748 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.91■□□□□ 0.3
KNTC1P50748 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.91■□□□□ 0.3
KNTC1P50748 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KNTC1P50748 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
KNTC1P50748 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KNTC1P50748 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.9■□□□□ 0.3
KNTC1P50748 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.9■□□□□ 0.3
KNTC1P50748 AC122714.2-201ENST00000502787 707 ntBASIC16.9■□□□□ 0.3
KNTC1P50748 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
KNTC1P50748 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
KNTC1P50748 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KNTC1P50748 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KNTC1P50748 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KNTC1P50748 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KNTC1P50748 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
KNTC1P50748 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
KNTC1P50748 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
KNTC1P50748 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KNTC1P50748 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KNTC1P50748 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KNTC1P50748 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
KNTC1P50748 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.9■□□□□ 0.3
KNTC1P50748 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KNTC1P50748 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KNTC1P50748 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KNTC1P50748 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KNTC1P50748 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KNTC1P50748 AL139400.1-201ENST00000366220 510 ntBASIC16.9■□□□□ 0.3
KNTC1P50748 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.9■□□□□ 0.3
KNTC1P50748 COX20P2-201ENST00000452636 358 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms