Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.7■□□□□ 0.74
CDK7P50613 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK7P50613 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.7■□□□□ 0.74
CDK7P50613 SPDYE21P-201ENST00000413323 827 ntBASIC19.7■□□□□ 0.74
CDK7P50613 METTL21AP1-201ENST00000438852 635 ntBASIC19.7■□□□□ 0.74
CDK7P50613 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDK7P50613 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.7■□□□□ 0.74
CDK7P50613 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDK7P50613 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.7■□□□□ 0.74
CDK7P50613 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDK7P50613 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDK7P50613 AC132938.6-201ENST00000623828 1655 ntBASIC19.7■□□□□ 0.74
CDK7P50613 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK7P50613 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK7P50613 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.7■□□□□ 0.74
CDK7P50613 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDK7P50613 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDK7P50613 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.7■□□□□ 0.74
CDK7P50613 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK7P50613 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDK7P50613 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK7P50613 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CDK7P50613 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK7P50613 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.69■□□□□ 0.74
CDK7P50613 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK7P50613 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.69■□□□□ 0.74
CDK7P50613 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK7P50613 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK7P50613 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK7P50613 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDK7P50613 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDK7P50613 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
CDK7P50613 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.69■□□□□ 0.74
CDK7P50613 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.69■□□□□ 0.74
CDK7P50613 RFPL4AP1-201ENST00000530883 850 ntBASIC19.69■□□□□ 0.74
CDK7P50613 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.69■□□□□ 0.74
CDK7P50613 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CDK7P50613 AL589182.2-201ENST00000619332 1049 ntBASIC19.69■□□□□ 0.74
CDK7P50613 AC092865.6-201ENST00000642101 219 ntBASIC19.69■□□□□ 0.74
CDK7P50613 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.69■□□□□ 0.74
CDK7P50613 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDK7P50613 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.69■□□□□ 0.74
CDK7P50613 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CDK7P50613 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK7P50613 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDK7P50613 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CDK7P50613 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK7P50613 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.68■□□□□ 0.74
CDK7P50613 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK7P50613 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDK7P50613 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK7P50613 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK7P50613 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK7P50613 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK7P50613 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK7P50613 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK7P50613 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK7P50613 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK7P50613 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK7P50613 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDK7P50613 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CDK7P50613 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK7P50613 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK7P50613 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK7P50613 AC254562.1-201ENST00000417586 456 ntBASIC19.68■□□□□ 0.74
CDK7P50613 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.68■□□□□ 0.74
CDK7P50613 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDK7P50613 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK7P50613 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK7P50613 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
CDK7P50613 MIR4469-201ENST00000583919 79 ntBASIC19.68■□□□□ 0.74
CDK7P50613 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK7P50613 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK7P50613 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK7P50613 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK7P50613 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK7P50613 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK7P50613 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK7P50613 AC002310.6-201ENST00000624451 1377 ntBASIC19.68■□□□□ 0.74
CDK7P50613 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK7P50613 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
CDK7P50613 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK7P50613 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK7P50613 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK7P50613 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK7P50613 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.67■□□□□ 0.74
CDK7P50613 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.67■□□□□ 0.74
CDK7P50613 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK7P50613 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK7P50613 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK7P50613 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CDK7P50613 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK7P50613 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK7P50613 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK7P50613 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CDK7P50613 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK7P50613 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.67■□□□□ 0.74
CDK7P50613 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
CDK7P50613 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.67■□□□□ 0.74
CDK7P50613 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms