Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TUBP50607 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.82■□□□□ 0.6
TUBP50607 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.82■□□□□ 0.6
TUBP50607 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TUBP50607 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TUBP50607 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
TUBP50607 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
TUBP50607 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TUBP50607 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBP50607 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 KRT16P4-201ENST00000453883 522 ntBASIC18.81■□□□□ 0.6
TUBP50607 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TUBP50607 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.81■□□□□ 0.6
TUBP50607 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.81■□□□□ 0.6
TUBP50607 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.81■□□□□ 0.6
TUBP50607 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.81■□□□□ 0.6
TUBP50607 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TUBP50607 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.81■□□□□ 0.6
TUBP50607 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
TUBP50607 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBP50607 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBP50607 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TUBP50607 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TUBP50607 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TUBP50607 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
TUBP50607 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TUBP50607 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TUBP50607 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TUBP50607 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TUBP50607 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TUBP50607 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.8■□□□□ 0.6
TUBP50607 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBP50607 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TUBP50607 TNRC18P3-201ENST00000441896 2691 ntBASIC18.8■□□□□ 0.6
TUBP50607 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBP50607 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.8■□□□□ 0.6
TUBP50607 AC135776.1-201ENST00000319817 2481 ntBASIC18.8■□□□□ 0.6
TUBP50607 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBP50607 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBP50607 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBP50607 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.8■□□□□ 0.6
TUBP50607 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBP50607 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBP50607 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TUBP50607 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TUBP50607 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.8■□□□□ 0.6
TUBP50607 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.8■□□□□ 0.6
TUBP50607 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.8■□□□□ 0.6
TUBP50607 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBP50607 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.8■□□□□ 0.6
TUBP50607 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.8■□□□□ 0.6
TUBP50607 BNIP3P18-201ENST00000593976 575 ntBASIC18.8■□□□□ 0.6
TUBP50607 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBP50607 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
TUBP50607 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TUBP50607 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.8■□□□□ 0.6
TUBP50607 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBP50607 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.8■□□□□ 0.6
TUBP50607 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBP50607 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBP50607 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TUBP50607 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBP50607 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TUBP50607 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBP50607 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBP50607 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBP50607 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.79■□□□□ 0.6
TUBP50607 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBP50607 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBP50607 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.79■□□□□ 0.6
TUBP50607 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.79■□□□□ 0.6
TUBP50607 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.79■□□□□ 0.6
TUBP50607 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.79■□□□□ 0.6
TUBP50607 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.79■□□□□ 0.6
TUBP50607 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms