Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.61■□□□□ 0.41
SLC1A6P48664 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SLC1A6P48664 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
SLC1A6P48664 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A6P48664 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SLC1A6P48664 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC1A6P48664 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A6P48664 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A6P48664 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A6P48664 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC1A6P48664 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC1A6P48664 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC1A6P48664 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC1A6P48664 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC1A6P48664 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SLC1A6P48664 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A6P48664 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC1A6P48664 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A6P48664 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC1A6P48664 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A6P48664 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A6P48664 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SLC1A6P48664 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A6P48664 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
SLC1A6P48664 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SLC1A6P48664 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC1A6P48664 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A6P48664 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SLC1A6P48664 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A6P48664 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
SLC1A6P48664 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A6P48664 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC1A6P48664 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A6P48664 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A6P48664 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A6P48664 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A6P48664 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC1A6P48664 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A6P48664 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC1A6P48664 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A6P48664 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A6P48664 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A6P48664 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A6P48664 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A6P48664 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A6P48664 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A6P48664 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC1A6P48664 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A6P48664 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A6P48664 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SLC1A6P48664 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A6P48664 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SLC1A6P48664 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A6P48664 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SLC1A6P48664 AL353719.1-201ENST00000566847 864 ntBASIC17.59■□□□□ 0.41
SLC1A6P48664 REXO1L10P-201ENST00000615707 1290 ntBASIC17.59■□□□□ 0.41
SLC1A6P48664 REXO1L12P-201ENST00000622156 912 ntBASIC17.59■□□□□ 0.41
SLC1A6P48664 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A6P48664 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A6P48664 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A6P48664 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A6P48664 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SLC1A6P48664 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A6P48664 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SLC1A6P48664 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.58■□□□□ 0.41
SLC1A6P48664 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.58■□□□□ 0.41
SLC1A6P48664 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A6P48664 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A6P48664 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A6P48664 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A6P48664 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A6P48664 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SLC1A6P48664 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC1A6P48664 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A6P48664 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A6P48664 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A6P48664 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SLC1A6P48664 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SLC1A6P48664 TSPY17P-201ENST00000450329 467 ntBASIC17.58■□□□□ 0.4
SLC1A6P48664 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC1A6P48664 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.58■□□□□ 0.4
SLC1A6P48664 AC010240.3-201ENST00000607688 395 ntBASIC17.58■□□□□ 0.4
SLC1A6P48664 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A6P48664 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A6P48664 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC1A6P48664 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A6P48664 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC1A6P48664 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SLC1A6P48664 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC1A6P48664 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SLC1A6P48664 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A6P48664 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC1A6P48664 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A6P48664 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A6P48664 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A6P48664 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A6P48664 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SLC1A6P48664 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC1A6P48664 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A6P48664 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms