Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A1P43005 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A1P43005 STARP1-201ENST00000397973 869 ntBASIC18.72■□□□□ 0.59
SLC1A1P43005 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SLC1A1P43005 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC1A1P43005 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC1A1P43005 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A1P43005 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A1P43005 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SLC1A1P43005 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A1P43005 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A1P43005 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A1P43005 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A1P43005 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC1A1P43005 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A1P43005 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC1A1P43005 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A1P43005 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC1A1P43005 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC1A1P43005 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A1P43005 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A1P43005 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A1P43005 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
SLC1A1P43005 KRT8P47-201ENST00000604727 1398 ntBASIC18.71■□□□□ 0.59
SLC1A1P43005 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A1P43005 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A1P43005 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SLC1A1P43005 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A1P43005 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A1P43005 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SLC1A1P43005 FZD10-202ENST00000539839 3282 ntBASIC18.71■□□□□ 0.59
SLC1A1P43005 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A1P43005 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SLC1A1P43005 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A1P43005 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A1P43005 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A1P43005 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC1A1P43005 FAM8A6P-201ENST00000407496 1135 ntBASIC18.71■□□□□ 0.59
SLC1A1P43005 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.71■□□□□ 0.59
SLC1A1P43005 BX664615.1-201ENST00000443558 458 ntBASIC18.71■□□□□ 0.59
SLC1A1P43005 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC1A1P43005 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SLC1A1P43005 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC1A1P43005 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A1P43005 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC1A1P43005 AC066615.1-201ENST00000640911 628 ntBASIC18.71■□□□□ 0.59
SLC1A1P43005 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A1P43005 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A1P43005 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SLC1A1P43005 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SLC1A1P43005 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SLC1A1P43005 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
SLC1A1P43005 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC1A1P43005 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
SLC1A1P43005 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A1P43005 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
SLC1A1P43005 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC1A1P43005 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC1A1P43005 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SLC1A1P43005 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A1P43005 REXO1L11P-201ENST00000620964 1927 ntBASIC18.7■□□□□ 0.58
SLC1A1P43005 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A1P43005 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC1A1P43005 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SLC1A1P43005 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A1P43005 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SLC1A1P43005 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A1P43005 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A1P43005 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC1A1P43005 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SLC1A1P43005 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A1P43005 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.7■□□□□ 0.58
SLC1A1P43005 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SLC1A1P43005 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC1A1P43005 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.7■□□□□ 0.58
SLC1A1P43005 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SLC1A1P43005 AC004263.2-201ENST00000617183 678 ntBASIC18.7■□□□□ 0.58
SLC1A1P43005 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC1A1P43005 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SLC1A1P43005 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SLC1A1P43005 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A1P43005 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A1P43005 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A1P43005 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A1P43005 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A1P43005 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC1A1P43005 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A1P43005 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC1A1P43005 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A1P43005 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC1A1P43005 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC1A1P43005 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SLC1A1P43005 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms