Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NCAPD3P42695 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NCAPD3P42695 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NCAPD3P42695 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
NCAPD3P42695 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
NCAPD3P42695 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NCAPD3P42695 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NCAPD3P42695 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NCAPD3P42695 CENPM-205ENST00000404067 905 ntTSL 3 BASIC31.29■■■□□ 2.6
NCAPD3P42695 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NCAPD3P42695 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
NCAPD3P42695 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
NCAPD3P42695 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
NCAPD3P42695 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
NCAPD3P42695 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC31.29■■■□□ 2.6
NCAPD3P42695 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC31.29■■■□□ 2.6
NCAPD3P42695 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
NCAPD3P42695 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
NCAPD3P42695 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC31.28■■■□□ 2.6
NCAPD3P42695 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NCAPD3P42695 CR383656.12-201ENST00000549567 513 ntBASIC31.28■■■□□ 2.6
NCAPD3P42695 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NCAPD3P42695 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NCAPD3P42695 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
NCAPD3P42695 AC097637.2-201ENST00000624096 1997 ntBASIC31.28■■■□□ 2.6
NCAPD3P42695 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
NCAPD3P42695 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC31.28■■■□□ 2.6
NCAPD3P42695 TUBB3P1-201ENST00000405796 1332 ntBASIC31.28■■■□□ 2.6
NCAPD3P42695 AC002056.1-201ENST00000395613 760 ntBASIC31.27■■■□□ 2.6
NCAPD3P42695 MIR943-201ENST00000401286 94 ntBASIC31.27■■■□□ 2.6
NCAPD3P42695 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC31.27■■■□□ 2.6
NCAPD3P42695 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC31.27■■■□□ 2.6
NCAPD3P42695 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC31.27■■■□□ 2.6
NCAPD3P42695 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC31.27■■■□□ 2.6
NCAPD3P42695 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC31.27■■■□□ 2.6
NCAPD3P42695 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
NCAPD3P42695 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC31.27■■■□□ 2.6
NCAPD3P42695 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
NCAPD3P42695 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NCAPD3P42695 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
NCAPD3P42695 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NCAPD3P42695 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC31.27■■■□□ 2.6
NCAPD3P42695 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC31.27■■■□□ 2.6
NCAPD3P42695 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NCAPD3P42695 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NCAPD3P42695 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
NCAPD3P42695 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC31.27■■■□□ 2.6
NCAPD3P42695 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC31.27■■■□□ 2.6
NCAPD3P42695 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC31.27■■■□□ 2.6
NCAPD3P42695 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC31.27■■■□□ 2.6
NCAPD3P42695 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC31.26■■■□□ 2.59
NCAPD3P42695 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NCAPD3P42695 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NCAPD3P42695 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC31.26■■■□□ 2.59
NCAPD3P42695 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
NCAPD3P42695 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NCAPD3P42695 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
NCAPD3P42695 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
NCAPD3P42695 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
NCAPD3P42695 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NCAPD3P42695 RPL30-202ENST00000396070 440 ntTSL 2 BASIC31.26■■■□□ 2.59
NCAPD3P42695 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC31.26■■■□□ 2.59
NCAPD3P42695 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC31.26■■■□□ 2.59
NCAPD3P42695 AC140878.1-201ENST00000565277 250 ntBASIC31.26■■■□□ 2.59
NCAPD3P42695 COX11-202ENST00000571584 1108 ntTSL 2 BASIC31.26■■■□□ 2.59
NCAPD3P42695 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC31.26■■■□□ 2.59
NCAPD3P42695 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
NCAPD3P42695 AC005082.1-201ENST00000413042 2259 ntBASIC31.26■■■□□ 2.59
NCAPD3P42695 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NCAPD3P42695 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC31.26■■■□□ 2.59
NCAPD3P42695 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
NCAPD3P42695 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NCAPD3P42695 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NCAPD3P42695 ESPNP-201ENST00000270691 2015 ntBASIC31.25■■■□□ 2.59
NCAPD3P42695 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
NCAPD3P42695 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
NCAPD3P42695 AL590787.1-201ENST00000568856 1315 ntBASIC31.25■■■□□ 2.59
NCAPD3P42695 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC31.25■■■□□ 2.59
NCAPD3P42695 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC31.25■■■□□ 2.59
NCAPD3P42695 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
NCAPD3P42695 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NCAPD3P42695 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NCAPD3P42695 EDF1-203ENST00000371649 790 ntTSL 2 BASIC31.25■■■□□ 2.59
NCAPD3P42695 AC107890.1-201ENST00000422478 521 ntBASIC31.25■■■□□ 2.59
NCAPD3P42695 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NCAPD3P42695 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC31.25■■■□□ 2.59
NCAPD3P42695 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC31.25■■■□□ 2.59
NCAPD3P42695 TSFM-210ENST00000550559 897 ntTSL 5 BASIC31.25■■■□□ 2.59
NCAPD3P42695 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC31.25■■■□□ 2.59
NCAPD3P42695 SPDYE22P-201ENST00000582158 798 ntBASIC31.25■■■□□ 2.59
NCAPD3P42695 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
NCAPD3P42695 AC093484.2-201ENST00000580996 2166 ntBASIC31.24■■■□□ 2.59
NCAPD3P42695 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
NCAPD3P42695 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NCAPD3P42695 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
NCAPD3P42695 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
NCAPD3P42695 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC31.24■■■□□ 2.59
NCAPD3P42695 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC31.24■■■□□ 2.59
NCAPD3P42695 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
NCAPD3P42695 KRT18P32-201ENST00000424695 1287 ntBASIC31.24■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms