Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.87■□□□□ 0.61
CHRNA3P32297 SPDYE15P-201ENST00000424157 909 ntBASIC18.87■□□□□ 0.61
CHRNA3P32297 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA3P32297 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.87■□□□□ 0.61
CHRNA3P32297 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.87■□□□□ 0.61
CHRNA3P32297 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CHRNA3P32297 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA3P32297 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA3P32297 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.87■□□□□ 0.61
CHRNA3P32297 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.87■□□□□ 0.61
CHRNA3P32297 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA3P32297 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CHRNA3P32297 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.87■□□□□ 0.61
CHRNA3P32297 LINC01126-201ENST00000623515 1646 ntBASIC18.87■□□□□ 0.61
CHRNA3P32297 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA3P32297 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA3P32297 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA3P32297 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.87■□□□□ 0.61
CHRNA3P32297 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA3P32297 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA3P32297 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.86■□□□□ 0.61
CHRNA3P32297 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA3P32297 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CHRNA3P32297 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA3P32297 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA3P32297 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA3P32297 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA3P32297 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA3P32297 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA3P32297 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA3P32297 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA3P32297 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.86■□□□□ 0.61
CHRNA3P32297 AC034232.1-201ENST00000506026 1064 ntBASIC18.86■□□□□ 0.61
CHRNA3P32297 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CHRNA3P32297 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA3P32297 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.86■□□□□ 0.61
CHRNA3P32297 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.86■□□□□ 0.61
CHRNA3P32297 AL121956.5-201ENST00000625261 221 ntBASIC18.86■□□□□ 0.61
CHRNA3P32297 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.86■□□□□ 0.61
CHRNA3P32297 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CHRNA3P32297 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA3P32297 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA3P32297 AC012313.1-201ENST00000593393 3059 ntBASIC18.86■□□□□ 0.61
CHRNA3P32297 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA3P32297 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNA3P32297 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA3P32297 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA3P32297 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA3P32297 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CHRNA3P32297 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA3P32297 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CHRNA3P32297 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA3P32297 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CHRNA3P32297 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA3P32297 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA3P32297 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.85■□□□□ 0.61
CHRNA3P32297 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.85■□□□□ 0.61
CHRNA3P32297 RASA4DP-201ENST00000460726 1199 ntBASIC18.85■□□□□ 0.61
CHRNA3P32297 SEC1P-202ENST00000473944 940 ntBASIC18.85■□□□□ 0.61
CHRNA3P32297 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.85■□□□□ 0.61
CHRNA3P32297 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA3P32297 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA3P32297 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CHRNA3P32297 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.85■□□□□ 0.61
CHRNA3P32297 AL358472.4-201ENST00000633140 710 ntBASIC18.85■□□□□ 0.61
CHRNA3P32297 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.85■□□□□ 0.61
CHRNA3P32297 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA3P32297 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.85■□□□□ 0.61
CHRNA3P32297 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA3P32297 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA3P32297 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.85■□□□□ 0.61
CHRNA3P32297 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA3P32297 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA3P32297 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA3P32297 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA3P32297 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA3P32297 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.85■□□□□ 0.61
CHRNA3P32297 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.85■□□□□ 0.61
CHRNA3P32297 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA3P32297 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.84■□□□□ 0.61
CHRNA3P32297 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.84■□□□□ 0.61
CHRNA3P32297 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CHRNA3P32297 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.84■□□□□ 0.61
CHRNA3P32297 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 KRT18P23-201ENST00000435622 1283 ntBASIC18.84■□□□□ 0.61
CHRNA3P32297 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.84■□□□□ 0.61
CHRNA3P32297 FAM86EP-206ENST00000510506 987 ntBASIC18.84■□□□□ 0.61
CHRNA3P32297 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.84■□□□□ 0.61
CHRNA3P32297 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA3P32297 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
CHRNA3P32297 AC091076.1-201ENST00000610741 619 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms